Gordonia otitidis: LK459_14750
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Entry
LK459_14750 CDS
T07915
Name
(GenBank) tandem-95 repeat protein
Organism
goi
Gordonia otitidis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Cadherin_3
Big_13
Motif
Other DBs
NCBI-ProteinID:
UEA57863
LinkDB
All DBs
Position
3217330..3222882
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AA seq
1850 aa
AA seq
DB search
MSKSAIRKLGVTKRVVASSGIAAALLAVSPVAVAMADDTSGGATGSAAESKPTSVTDTEQ
TSPPPSADVSRSGGTAGDAATAVGTSAVAEAGTGGVDMQPTSGVAAPSQSESPDSAPVAA
EPAATSDTGGADGQTPETTQAPAGPVPAPGAAAPTHPESSAQSPVAVNKPPSPSVLPPHV
SKPTAAGERPVTGTHTDTPGSGSARSGVGPDRTTTMSAQPISGGASVSGAVITAVGSAVG
SVTDALTDAFETVKEGIIGQIVGDHGTQGLILVNQGAVAAAVLNRRSRDSESDSADNYLA
VMQPGESVFVPERTVADLSLGKHSWDAEADDVELTEPTAQTFAARSVMLLSTVFDAGNLF
LDPDDSDFSGVDYNGMPNGTVVYGNPDDAGLTYTVSDDGASVTISNGGSAPVAVIDSINA
SVTSTKIIDPGSSASYSTGSSRNLAIQGQRVDANGQPTGGGTPVVLGLVQVTNNSGTPSV
SNVTGTQVAPVRNSSSQLWAAIDPDNKYLDAGDDPASLQFTPGNPTGLSYELANDGSTIT
FHNDSEETVALMGANVYSNAPLGNGIYVIAPHESATAPTAPYAGYYVETPRDSDGKVGLL
GFVLLKDGMASSVPIGTVPAIPSVEELNTDPGNLYWNPTDSDPSTGLVPTNAVGANPVTD
GVYYSVDGHDVTVYNDGTKNIAVLVTSVSPSGARATHFTEIAAGTTHTVTVASGVTSYVV
VEGQRVSTGPDTGKPALYGVVIAQNPGTGAGLQTITYDLFPNDGIPTISTHKWLDADPDN
RFWDPGDSDTTTQSVVPATAVGGDAAADGVYYSTGSDGITFHNGSDHDIAIVVTNPYAGS
NDDQQSLVVVSPGDRFTFNQSRAEYSSAPVYLTVQAPRVASGVDAGTPVLYGVVMMYPGT
STSPATYSVYDTIPGDTIAPITSEFWRSADPSNSYWTPGDPDQTYQGSGQYPRFAEMQTL
ADAGVTYTYDSSAGTVTITNSGTHDVAVVNSRAENFDVLAAGTSKTYSVADSSFGQSTYL
VQGARNAQGKPVVYGLVSAGYGSAYAQDGTALITNNAPYASSNTTGYSGTVKTLDPDGDT
TTMQLTGQPLYGTVVFDPATGAYVYTPNAGVEHQAASGQTSYDSFLVTITDQYGASSQQN
IGVQITPKNQVPVGPGSTVDGGTAGSVGVTDPDGDHLSYYVASGPTKGSVVVNADGTYVY
TPTTPLAHGDTLSDSFSVYVFDGHGGSLTVPVSVTATGDNAAPTAQLSPGQNSYSGTVLG
SDQDNDPLTYAIGTGATNGIVTVDSSTGAYTYMPNAGAEHAAAGDGPTTDSFTVLVSDGH
GGTATVTVPVTLAPKNLAPTASATGSGATGAIAAQDADHDPLAYTVSGQPVSGSVVVDSH
GSYTYTPTTPVAHGSTLHDSFDVTVDDGYGGSAVVPVAVTLVGPNAVPTGSVTRDGDAEY
AGTVVGADTDNDSLTYTVVSGPSHGSVTLDPATGQFSYTPNAGVEHAAAAGGASSDAFEV
KVSDGYGGSVVVPVAVTLTPKNTLPTVPDAVAGSYTGSVAGTDADLDALSYTVIGQPLHG
TVTVGADGSYVYTPNAGAEHAAGLGGPASDAFEVTVSDGHGGSVNVPVAVVITPKNTAPT
GTVTVGSADAAGVVVLTPAYTDADGDPVTVKIIGAQHGTVTDNGDGTYTYTPDSGYAHEQ
DFVETLTVTASDGALETATQAQIAVAKRNATPTIAIAQGAADASTGAVTVTPTVADADGD
TVTTAVTTQPTGGTVTSNADGTFTYTPNATKRAAGDYSDSFTITASDGHGGISQKAVTVA
VKKPAAPAQTGWAKFWSGVAAFYATVHGATSSAWNYFWHWLVGALGGRRA
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcagccattcgcaaactcggtgtcaccaagcgcgtggtggcgtcctcgggg
attgcggccgcgcttctcgccgtcagtcccgtagccgtggcgatggctgacgatacctcc
ggcggcgcaaccggttccgccgccgaaagcaagccgaccagtgtcacggacacggaacag
acctctcctccaccgagcgccgatgtgagcaggtcgggcggcaccgccggagacgccgcg
acagccgtcgggacgtcggccgtggcggaggcgggcacgggcggcgtcgacatgcagccc
acgtccggtgtggccgcgccgagtcagtccgaatcccctgattcggcacccgtggccgcc
gaacccgccgcgacgtcggacaccgggggtgccgacggacagacacccgagaccacgcag
gctcctgccgggccggtacctgcgccgggtgccgcggccccgacgcaccccgaatccagc
gcccagagtccggtcgccgtgaacaagccgccgtcgccgagcgtgctcccaccgcacgta
agcaagccaacggccgccggcgagcggcccgtcaccggaacgcacacggacactccaggt
agcggttcggctcggagtggagtcggtcctgatcggacgacaacgatgtctgcccaaccg
atctccggcggggcatccgtgagcggtgcggtcatcacggccgtcggctcggccgtcggc
tcggtcaccgatgccctgactgatgcgttcgagaccgtcaaggaaggcatcatcgggcag
atcgtcggcgatcatggcacccaggggctgatcctggtcaaccagggcgctgtggccgcc
gcggtgctcaacagacgctcacgcgattcggagtccgactccgccgacaactacctcgcc
gtgatgcagcccggcgagtcggtgttcgtccctgagcgcaccgtcgcggatctctcgctg
ggcaaacacagctgggatgccgaggccgacgacgtcgagctgaccgagccaacggcgcag
acgttcgcggcgcgttcggtgatgctgttgtcgacagtgttcgacgccggcaacctcttc
ctcgatcccgacgacagcgacttcagtggcgtcgactacaacgggatgccgaacggcaca
gtcgtgtacggaaatcccgacgacgcaggcctgacctacaccgtgtccgatgacggcgcc
agcgtgacgatcagcaacggggggtcggctccggtggcggtcatcgactccatcaacgcc
tcggtgacttcgacgaagatcatcgaccccgggtccagcgcgagctactcgaccggctcc
tcgcggaacctggcgatccagggacaacgcgtcgatgccaacggccagccaacaggcggt
ggaaccccggtggtgctgggactcgtgcaggtgaccaacaattcgggaacccccagcgtc
tcgaacgtgacggggacgcaggtggctcccgtgcgaaactcgtcgtcacaactgtgggct
gcgatcgacccggacaacaagtacctcgatgccggcgacgatccggcgtcgttgcagttc
acgccgggcaacccgacaggattgagctacgaactggcaaatgacggctcgacgatcaca
tttcacaacgactccgaggagaccgtggctctgatgggagccaatgtgtacagcaatgcg
cccctgggcaacggaatctatgtgatagctccgcacgagtccgcgaccgcccccacggcg
ccttacgccggctactacgtcgaaaccccgcgtgattccgacgggaaggtcggcctactc
gggtttgtgttgctgaaagacgggatggcctcgtcagtaccgatcggaacagtgcccgcc
atcccgtcggtcgaggaactcaacaccgacccgggaaacctctactggaacccgaccgac
tccgatccgtccaccggcctcgtgcccaccaacgccgtcggcgccaatcccgtgaccgat
ggcgtgtactactccgtcgacgggcacgacgtcaccgtctacaacgacggaacgaagaac
atcgcggtgctggtcacgagtgtgtccccatccggggcccgtgcgacccacttcaccgag
atcgcggcgggcaccactcacaccgtcacggttgcctccggcgtaacgtcgtacgtcgtg
gtcgagggccagcgggtctcgacggggccggacacgggtaaacccgccctgtacggcgtg
gtgattgcgcaaaaccccggcacgggcgccggtctgcagaccatcacctacgacctcttc
ccgaatgacggcatcccgacgatttcgacacacaagtggctcgacgccgaccccgacaac
agattctgggatcctggtgacagcgacacgaccacccagtcggttgtgcccgcgacagca
gtgggcggtgatgcggccgctgacggggtgtattactcgaccggcagtgacggcatcaca
ttccacaacggcagcgaccacgacatcgccattgtggtgacgaatccctacgcgggcagc
aacgacgaccagcagtccctggtggtcgtatcgccgggagacaggttcaccttcaaccag
tcgcgcgctgaatacagcagtgcccctgtgtatctgaccgtgcaggccccgcgggtcgcc
agcggcgtcgatgccggtacacccgtgctctacggggtcgtgatgatgtacccgggtaca
tcgacatcgcctgcgacctactctgtgtacgacacgatccctggcgacaccatcgctccg
atcacgtccgagttctggcgatccgcggacccgtcgaactcgtattggacgccgggtgat
cccgatcagacctaccagggttctggccagtacccccgattcgccgagatgcaaacactc
gcggatgcgggcgtcacctatacctacgactcttccgcgggaacggtgaccatcaccaac
tccggcactcacgatgtcgcggtggtgaattcgcgagccgagaatttcgacgtactggcg
gcgggcaccagcaagacctacagcgtggccgattcgtcgttcggtcagagcacgtacctc
gtccagggggcgcgcaacgcgcaggggaagcctgtggtgtacggactcgtctccgcgggt
tacgggtcggcgtatgcgcaggacggcacagcgttgatcaccaacaatgccccctacgca
tcgtcgaacaccaccgggtactccgggacggtgaaaacgcttgatcccgacggagacacg
acgacgatgcagctcaccggccagccgctctacggcacggtggtgttcgatccggcaacg
ggagcttatgtgtacacgcccaatgccggcgtcgagcatcaggcagcgagtggtcagacg
agctacgactcgttcctcgtgaccatcaccgatcagtacggggcatcgtcgcagcagaac
atcggcgtgcagatcacgccgaagaaccaggtgcccgtcggtcccggctcgacggtcgac
ggcggaaccgccggttcggtcggtgtcaccgaccctgatggcgaccacctgtcgtactac
gttgcttctgggccgaccaagggttcggtcgtcgtgaacgccgacggcacctacgtctac
accccgacgaccccgctggcacacggtgacacgttgtcggactcgttcagcgtctatgtc
ttcgacggacacggcggcagcctgacggtgcctgtctcggtgacggcgaccggagacaac
gccgcaccgacggcgcagttgtcgcccggtcagaactcgtatagcggaacggttctcggg
tcggatcaggacaacgacccgctgacgtatgcgattgggacaggtgcaacgaacggcatc
gtcaccgtcgactcgtcgaccggggcctacacgtacatgccgaacgccggggcggagcac
gccgcggcgggcgacgggccgacaacggattcgttcacggtgctggtatccgacggacac
ggcggcaccgcaacggtgacggtaccggtcaccctcgcgccgaagaacctggcgcccacc
gcgtccgcgaccggtagcggcgcgaccggtgcgatcgctgcgcaggacgcagaccacgac
ccgctggcgtatacggtgtcggggcaaccggtttcgggttcggtggtggttgattcacac
ggctcgtacacgtacacgccgacgacgccggtggctcacgggagcacactgcacgacagt
ttcgacgtcacggtggacgacggttacggaggaagcgccgtggtgcccgtagcggtgacg
ctcgtcgggcccaacgccgtgccgaccggcagtgtgacgcgcgacggtgacgccgaatac
gcaggcaccgtcgtcggagccgatacggacaacgattcgctgacctacaccgtcgtgtcc
ggtccgtcgcacggatcggtgaccctcgatcccgcgacgggacagttcagctacacgccg
aacgcgggtgttgagcatgctgccgcggccggtggtgcgtcgtcggatgccttcgaggtg
aaggtatccgacggatacggtggttcggtggtcgtcccggtggcggtgacgttgacaccg
aagaacactctgccgaccgtgcccgacgccgtggccggtagctacacgggctcggtcgcc
ggaactgacgccgacctcgatgcgttgagctacacggtgatcggtcagccactgcacggc
accgtgaccgttggcgctgacgggtcatatgtctacaccccgaacgcgggtgccgagcat
gctgcgggcctcggcggtccggcgtcggatgccttcgaggtcacggtgtccgacggtcac
ggcggatcggtgaacgttccggtcgcggtggtgatcactccgaagaacaccgcgccaacg
ggaaccgtgacggtgggttccgccgacgcggcgggcgtcgtcgtgttgactccggcgtac
accgatgccgacggcgacccggtgacggtcaagatcatcggcgctcagcacgggactgtg
accgacaacggcgatggaacctacacctacacaccggattccgggtatgcccacgaacag
gacttcgtcgagacgctgacggtgacagccagtgacggcgcgttggagacggcaacccag
gcgcagatcgcggtcgcgaagcgcaatgcgacgccgaccatcgcgatcgcgcagggggcc
gctgatgcgtcgaccggagcggtgaccgtgacgcccaccgtcgctgacgcggatggcgat
accgtgaccacggcggtgacaacgcagccgaccggtggcaccgtgacgtcgaatgcggac
ggcacgttcacctacaccccgaacgcgaccaagcgtgccgcaggcgactactccgactcg
ttcacgatcacggcctctgacgggcatggtggcatcagccagaaggctgtgaccgtcgcg
gtcaagaagcccgcggcgccagcgcagaccggctgggccaagttctggagtggtgttgcc
gcgttctacgcgacggtgcacggcgctacgtcgagcgcgtggaactatttctggcactgg
ttggtcggtgcattgggtggtcggcgcgcgtga
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