Gordonia otitidis: LK459_15715
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Entry
LK459_15715 CDS
T07915
Name
(GenBank) AAA family ATPase
Organism
goi
Gordonia otitidis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
AAA_16
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
HTH_31
DUF815
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UEA58036
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Position
3425109..3428894
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AA seq
1261 aa
AA seq
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MRPESVSTREELGRALTELRVQAGLSVRDVAADADALLGTVAGWFAGQHAPTRASRAMFT
RVLGVCGVTESDDVARWWEAVERSARRTGRRRTRPESPYRGFAAFGPADNQLFFGRDDLV
ARLVDLIGATRSPDREANDMARGVMVVGMSGVGKSSLVRAGLLAQVTHEGPLAGWRHAVM
TPGDDALAALDAAMNELDADEHPERPALLIIDQLEEMWTQNSDDARKLAITRILDAATAP
GSDVVPVGVLRADFYGRVVPWVPKTLENAQLVVPPMQRDQLREIIVGPARVSDVEVEPEL
VEMLLDDAVPAAGSTAAGDLPLLSYALLATWEQSDGRRMTVRDYLATGRIGGAVEQAAEK
VYRELTPDEQQIARRMLLAMVNVDEDAVTRRRVPLDELTVDGDDRAAHVLENYAASRLVT
VSSSHAQVTHEALLTAWPRLREWIDDDREQLLLRRRLRAYSEPWDADGRPDDMLIGGSRL
EVFDQLAQGAGDDPIDPVSREFLNSANARRAALVDRERRRSAQLRRVALFAAVFAVVALL
AAVFAVVAGVNAIHQREDAEDARNEALSRQLAVQSADLGTRDPFMSAQLAMVAYESSPTL
EARSRLIDATGRGVPVRYLGDPGSVLMSRAGSLIAAAGAGGQVRLFRVDDGGIASRIADF
RAPGGGGRLAGVALMPDARTLLLGGRGTITAWNIADPARPTRQYDFPEVSGDINRITVSP
DGRMVIASVPDAGVAAWVAADGTWRRIPLPPKVAGVAGAAAFSPDGKSLATSSANRRIDL
WRVDGDALVPTGEIPLDQWRDNELAQGLVYSPDGSRLLAGLRSRVIDEFDVADPGAPRSV
ARFTGFNSYVNAVGLSTDGTKVVGAGADNTIRVFDRSDPAAAPQVMTGSSNAVSVMFAGD
HVVASSEDGRVQDWPPVRGMSSVGTNSVYQIPANRDATAIVAADTGTDGRITQWRVERDG
LVRSGPDLVPAPGTVYSGAVVMTPSGRVVTTGTVTGTVQFADYSDPQKPHVVGSVAAQPT
LNETVDYSERSGLAVTGATDGNNLTVIDASTLSAPRVVSRFDAGGGIAWASLSPDGRTAA
VATVTGPVRLLDLSNPAAPRAYPDPIAFKASALSVRFDPAGSRLVATSEERNVEVVDISD
KEHPRRTAELSGPAGQLYSAGFSADGTRVIAGGSNSEVWVWDLTDGAADVVLRSYPGRVY
DVRFLPDDRILAAGQGGFMESWNLGPDRIIDGLCAQGGDPITADEWRTYVHGIDYRSPCR
E
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggagtcggtgagcacgcgtgaagaactcgggcgtgcactcacagaactacgc
gttcaggcgggactgagtgtgcgggatgtcgccgccgacgcagacgcactactcggaacc
gttgcgggctggttcgccggacagcacgccccgacccgtgcgagccgggccatgttcacc
agggtgctcggggtctgcggcgtgaccgaatccgacgacgtcgccaggtggtgggaggcg
gtagagcgcagcgcgcgtcggacgggtcggcggcgtactcgcccggaatccccctatcgc
ggattcgccgcgttcgggccggccgacaatcaactcttcttcggacgtgacgatctcgtc
gcacgactcgtcgatctgatcggtgcgacccgcagtccggatcgtgaggccaacgacatg
gctcgcggcgtgatggtcgtcggtatgtcgggcgtcgggaaatcgtcactcgtgcgcgcg
gggctgctcgcccaggtcacccacgagggcccgctggccggctggcggcacgcggtgatg
accccgggagacgatgccctcgccgcactcgacgctgcgatgaacgagttggatgccgac
gagcacccggagcggcccgcactgctgatcatcgatcagctcgaggagatgtggacgcag
aactccgacgacgcgcgcaagctcgcgatcacgcgaattctcgacgccgcaacggcgccg
ggatccgacgtcgtgccggtcggtgtgttgcgcgcggacttctacggacgcgtcgtccca
tgggttccgaagacactggagaacgcgcagttggtggttccgccgatgcagcgtgatcag
ctacgcgagatcatcgtcggccccgcgcgagtctccgacgtcgaggtcgagcccgaactg
gtggagatgctcctcgacgacgccgtgcccgcggcagggtccacggcggcgggtgatctc
ccgctgctgtcctacgcgctgttggcgacctgggagcaatccgacggtcgacgcatgacc
gtgcgcgactacctcgccaccggccgcatcggcggggcggtcgagcaggcagcggagaag
gtctaccgggaactgacacccgatgagcagcagatcgcgcgacgcatgctgctcgcgatg
gtgaacgtcgacgaggatgcggtgacccgacgacgtgttccgctcgacgaactgaccgtc
gacggtgacgaccgggccgcgcacgtgctggagaactacgctgcgtcgcgtctggtcacc
gtgtcgtcgtcgcacgctcaggtcacccacgaggcgctgctgaccgcctggcctcggctg
cgcgaatggatcgacgacgatcgtgagcagctgttgttgcgccgcaggttgcgcgcgtac
tccgaaccgtgggatgccgacggcaggcccgacgacatgctgatcggcggatcccgactc
gaggtcttcgatcagctggcgcagggggccggggacgacccgatcgatccggtcagtcgc
gaattcctcaactccgcgaacgcacgtcgcgccgcactcgtcgaccgtgagcgccgtcgt
tcggcacagttgcgtcgggtcgcgctgttcgccgcggtgttcgcggtcgtcgccctgctc
gctgcggtgttcgcggtcgtcgccggtgtgaacgcgattcaccagcgtgaggacgccgag
gacgcacggaacgaggcgttgagccgacagctcgccgtgcagtcggcagacctcgggacg
cgtgacccgttcatgtcggcccagctcgccatggttgcgtacgagtcgtcgcccacgctc
gaggcgcgatcgcgtctcatcgatgccacaggtcgtggtgttccggtccgctatctcggc
gatcccgggtcggtgctgatgtcgcgcgcagggtcgttgatcgccgcggcgggcgcgggc
ggccaggtgcggctgttcagagtcgacgacggtggcatcgcgtcgcggatcgccgacttc
cgtgcgcccggcggaggcggcaggctggccggtgtcgcgctgatgcccgacgccaggacg
ctactgctcgggggacgtggaacgatcaccgcctggaacatcgccgaccccgcgcgtccg
acgcgccagtacgattttcccgaggtgagcggagacatcaaccggatcaccgtcagcccc
gacggtcggatggtcatcgcatccgtccccgacgcgggcgtcgcggcgtgggtggcagcc
gacggcacgtggcggcgaatcccgctgccaccgaaggtcgcaggcgtggccggtgcggcc
gcgttcagtccggacgggaagtcgctggccaccagcagcgcgaatcggcggatcgatctg
tggcgggtcgatggtgacgcactcgtcccgaccggggagatcccgctcgatcagtggcgc
gacaacgaactcgcgcaggggctcgtctacagtccggacggatcgcgtctactcgccgga
ttgcgcagccgcgtgatcgacgagttcgacgtcgccgatcccggggcaccgcggtcggtg
gcgcgtttcaccggcttcaacagctacgtgaacgccgtcggactcagcacggacgggacg
aaggtcgtcggggccggcgcggacaacaccatccgggtgttcgatcgtagtgatcccgcc
gcggcgccacaggtcatgaccggatcgtcgaacgcggtgtcggtgatgttcgcaggcgac
cacgtggtggcctccagtgaggacggtcgggtccaggactggccgccggtgcgcggcatg
tcgtcggtgggcaccaacagcgtctatcagattcccgcgaaccgcgatgcgacggcgatc
gtcgccgcagacaccggaaccgacggtcgtatcacccagtggcgcgtcgagcgcgacggg
ctcgtgcgtagcgggcccgatctcgttccggccccgggaacggtctactcgggggcagtg
gtgatgaccccctcgggtcgcgtcgtcacgactggaaccgtgaccggcaccgtgcaattc
gccgactacagcgatccgcagaaaccgcatgtggtcggcagtgtggcagcccagccgacg
ttgaacgaaaccgtcgactacagcgaacgctccggactcgccgtcaccggcgccaccgac
ggcaacaacctcaccgtcatcgacgcatcgacgctctcggcccctcgggtcgtctcccgc
ttcgatgcaggcggcggcatcgcgtgggcgtcgttgagtccggatggccgcaccgcagcg
gtggcgaccgtcacgggaccggtgcgtctcctggatctgtcgaaccccgcggcaccgcgc
gcctatccggacccgatcgcgttcaaggcatcggcgctctcggtgcgcttcgaccccgca
ggcagcagactcgtcgcgacgtcggaggaacgcaacgtcgaggtggtcgacatctccgac
aaggagcaccctcgcagaaccgctgagctctccgggcccgcggggcagttgtacagcgca
ggcttctccgcggacggcacacgggtgatcgcaggcgggagcaactccgaggtgtgggtg
tgggacctcaccgacggcgccgccgacgtggtgctccggtcgtatcccgggcgggtctac
gacgtccgattcctgcctgacgatcgcatcctcgcggcaggtcagggcgggttcatggag
agctggaacctgggccccgacaggatcatcgacgggctgtgtgcacagggtggtgacccg
atcacggccgacgagtggcgcacttacgtccacggcatcgactaccgatccccgtgtcgt
gaatga
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