Gordonia otitidis: LK459_16980
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Entry
LK459_16980 CDS
T07915
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
goi
Gordonia otitidis
Pathway
goi03420
Nucleotide excision repair
goi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK459_16980
03430 Mismatch repair
LK459_16980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_16980
Enzymes [BR:
goi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK459_16980
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK459_16980
MMR (mismatch excision repair)
Other MMR factors
LK459_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UEA58266
LinkDB
All DBs
Position
3728358..3730493
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AA seq
711 aa
AA seq
DB search
MPDSPSSPLDPRDRSPRDRSILDGLDPEQRAAVLAPRGPVCVLAGAGTGKTRTITRRIAY
LIDQGQVNPGQVLAVTFTARAAGEMRGRLRSLGIGADGPSVLAQTFHAAAMRQLRYFWPR
AFGSASWELLDNKFPVVGRAARRAGLDSSTDTVRDLMSEIEWAKASLIGPEDYVAAVTRA
PRETPAPAAQVAKAFAAYEDAKVSPDGDRLLDFDDLLIFMTTILESDAGLADEFRSRYRC
FVVDEYQDVTPVQQGLLDAWLGARDDLTVVGDANQTIYTFTGATPKYLLDFGRRFPDATL
VRLERDYRSTPQVVSLANRVIGAARGRIAGTRLQLIGQREPGPEPAFAEYDDEPSEAGAV
AAAIKRLMNAGVPASEIAILYRINAQSENHEQALTEAGIPYQVRGGEAFFTRTEVRQAMR
QLSQVAQRGVRDDVELTTVVRSVLGELGMSDDEPKGAQAKARWQSLRALSGLADDMLVDN
PDLTLTELVAELDARSQARHPPTVQGVTLSSLHAAKGLEWDAVFLVGLTEGSLPISQAIK
GSFDDVEEERRLFYVGVTRAREHLHISWAIARNEGGRARRRSRFLADVVPDDSPASRIAP
ASKRAPRKGPTCRVCGSRLIDATATLLGRCADCPSDLDEGLLVALKEWRRTRADSKKVPA
FVVFSDKTLLAIAEQRPTDSAALVSISGIGAAKLNEYGDEVIELVKSAGQK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacagtccctcatcgcccctcgacccacgtgaccgcagtccacgtgatcgcagc
atcctcgacggactcgacccggaacagcgcgccgcggtcctcgcgccgcgcggcccggta
tgtgtgctggcaggcgcggggacgggcaagacgcgcactatcacgcgtcggattgcgtat
ctcatcgatcagggacaagtgaacccgggccaggtgctcgctgtcacgttcaccgcacga
gcagcgggggagatgcgcggcaggctcaggtcgctcgggatcggcgcggatgggcccagt
gtgctggcgcagaccttccatgcggcggccatgcgccagctccgctacttctggccgcgc
gcattcggcagcgcgtcgtgggaactgctcgacaacaagttccccgtcgtcggtcgagcg
gcgcgtcgagcggggctcgacagttcgacggacaccgtgcgcgacctcatgtcggagatc
gaatgggcgaaggcctcgctgatcggtcccgaggactacgtagctgccgtgacccgcgcc
ccccgcgagactccggcacccgccgcgcaggtggcaaaggcgttcgccgcctacgaggac
gccaaggtctcgcccgacggcgaccgcctgctcgacttcgacgatctcctcatcttcatg
acgacgattctcgagtccgacgccggcctcgccgacgaattccgttcgcgctaccggtgt
ttcgtcgtcgacgagtatcaggacgtgactcccgtgcagcagggtctgctcgacgcgtgg
ctcggggcgcgtgacgacctcaccgtcgtcggcgatgccaatcagacgatctacacgttc
accggggccaccccgaagtacctgctcgatttcggccgtcgattccccgacgccacgctc
gtgcggctcgagcgcgactaccggtcgacgccgcaggtggtcagcctcgccaaccgcgtg
atcggtgccgcgcgcggacgaatcgccggaacacgactgcaattgatcgggcagcgtgaa
cccggtcccgagcccgcgttcgccgaatacgacgacgagcccagcgaggcgggcgcggtc
gctgcggccatcaagcgcctcatgaacgccggtgtgcccgcctcggagatcgcgatcctc
taccgcatcaatgcacagtcggagaatcacgagcaagcactcaccgaagcgggtatcccg
tatcaggtgcgcggcggggaggccttcttcaccaggaccgaggtccgccaggcgatgagg
caactgtcgcaggtggcccaacgcggagtccgcgacgacgtcgaactcaccacggtggtg
cgctcggtcctcggcgaactgggcatgtccgacgacgagcccaagggtgcacaggcgaag
gcgcggtggcagtcgctgcgcgcgctgtcggggctggcagacgacatgcttgtcgacaac
cccgacctcacgctgaccgagttggtcgccgaactcgatgcgcggtcgcaggcacgccac
ccaccgaccgtgcagggcgtgacgctgtcgtcgctgcacgccgcgaagggtttggagtgg
gacgcagtgttccttgtcgggctcaccgagggatcgttgccgatcagccaggccatcaag
ggctcgttcgacgacgtcgaggaggaacgtcgactcttctacgtcggtgtgacccgtgcc
agagagcatctgcacatctcgtgggcgatcgcccgcaacgagggcggacgtgcgcgccgc
cgttcccgattcctcgccgacgtcgtccccgacgactcgcctgcgtcacgcatcgccccg
gcgtcgaagcgcgcaccgcggaaggggcccacgtgcagggtgtgcggctcccgtctgatc
gacgcgaccgccaccctgctcggccggtgcgcagactgcccgtcggacctcgacgaaggg
ttgctcgtcgcgctcaaggaatggcggcgtacgcgggccgattccaagaaggttcccgcc
ttcgtggtgttctccgacaagacgttgctggcgatcgcagagcagcgaccaacggactcc
gctgcgctcgtgtcgatttcgggtatcggggccgcgaagctcaacgagtacggcgacgag
gtcatcgaactcgtcaaaagcgcaggtcaaaaatag
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