Gordonia otitidis: LK459_17815
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Entry
LK459_17815 CDS
T07915
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
goi
Gordonia otitidis
Pathway
goi00300
Lysine biosynthesis
goi01100
Metabolic pathways
goi01120
Microbial metabolism in diverse environments
goi01230
Biosynthesis of amino acids
Module
goi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LK459_17815 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
goi01002
]
LK459_17815 (dapE)
Enzymes [BR:
goi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LK459_17815 (dapE)
Peptidases and inhibitors [BR:
goi01002
]
Metallo peptidases
Family M20
LK459_17815 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UEA58410
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Position
3888384..3889514
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AA seq
376 aa
AA seq
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MSTSRTPVTHLDLRADPVELTAALVDIESESRNESAIADAVEEALREQTIGFDVLRHGNR
VLARTDRGKPSRVILAGHLDTVPVADNLPSRRTVDDVEGDVLHGCGTVDMKSGDAVFLHL
AATMDDPAHDLTLIFYDCEEIAAEYNGLGVLERELPEWLSGDVAILGEPTAGQIEAGCQG
TLRVRLTASGTRAHSARSWMGDNAIHKLGGVLTTLANYEPRHVDIDGCEYREGLSAVGIG
GGVAGNVVPDDAWVTINFRFAPDRSVDDALDHVRDVFAEDLDTEMITLELTDAAPGALPG
LSHPAAAALVDAAHGRFRAKYGWTDVSRFSALGIPAVNLGPGDPNLAHRVDERVPVAQVT
EVTELLRTYLSAPAPS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacatcccgaacaccggtcacacacctcgatctgcgtgccgatcccgtcgaactg
accgcggccctcgtcgacatcgagagcgagtcgcgcaacgagtccgcgatcgccgacgcc
gtggaagaggccttgcgcgagcagacgatcgggttcgacgtgctccggcacggcaaccgc
gtgttggcccgcaccgacaggggtaaacccagccgggtcatcctcgccggtcacctcgac
accgtcccggtcgccgacaacctgccgagccgacgcaccgtcgacgacgtcgagggtgat
gtgttgcacggctgcggcacggtcgacatgaaatcgggcgacgcggtgttcctccacctt
gcggccacgatggacgaccccgcccacgacctgaccctcatcttctacgactgtgaggag
atcgccgccgagtacaacggtctgggagttctcgaacgtgaattgcccgaatggctttcg
ggagacgtcgccattctcggtgagccgaccgcaggccagatcgaggcgggttgccagggg
acactgcgtgttcggctcaccgcgtcgggtacgcgtgcgcactccgcgcgatcctggatg
ggcgacaacgcgattcacaagctcggcggtgtgctcactacgctcgcgaactacgaaccc
cgccacgtcgacatcgacggctgcgagtaccgcgaggggctgtcggccgtcggcatcggg
ggaggtgttgcgggcaacgtcgtccccgacgacgcgtgggtcaccatcaatttccgcttc
gctcccgaccgcagcgtcgacgacgcgctcgaccacgtccgcgacgtcttcgccgaagac
ctcgacaccgagatgatcacactcgaactgaccgacgccgccccgggagcacttccagga
ctgagccatcccgccgcggccgcattggtcgacgccgcgcacggccgattccgcgccaag
tacggctggaccgacgtctcgaggttctccgcgctcggtatccccgcggtcaatctcggc
cccggtgacccgaatctggcccatcgggtcgacgagcgcgtgcccgtcgcccaggtcacc
gaggtgaccgaactgctgcggacctatctgtccgcaccggccccgtcctga
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