Gordonia otitidis: LK459_18340
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Entry
LK459_18340 CDS
T07915
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
goi
Gordonia otitidis
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goi03032
]
LK459_18340
03036 Chromosome and associated proteins [BR:
goi03036
]
LK459_18340
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_18340
DNA replication proteins [BR:
goi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LK459_18340
Chromosome and associated proteins [BR:
goi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LK459_18340
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LK459_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
PqqD
Motif
Other DBs
NCBI-ProteinID:
UEA58503
LinkDB
All DBs
Position
4004472..4005107
Genome browser
AA seq
211 aa
AA seq
DB search
MNKAELIDELTAKLDTDRKTATQAVEQMVDSIVRAVNKGESVTITGFGVFEKRRRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVSGKQKLASSGPAVKRGSGATTTAAKKTTPAK
KTTAAKKTTPAKKTTAAKKTTPAKKTTAAKKTTPAKKTTAAKKTTPAKKTTAAKKTTTPA
KKTTAAKKSTGTAAKKTTAKKTTAAKKSTRR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgatgagctgacagcaaagctcgacacggatcgaaagacc
gcgacccaggcggtcgagcagatggtcgactccatcgtgcgtgcggtcaacaagggtgaa
agtgtcaccatcaccggattcggtgtcttcgagaagcgtcgtcgcgcaccgcgcgtcgca
cgcaacccgcggacgggcgagacggtgaaggtgcgcgctacgtccgtgcccgcgttccgt
cccggcgctcagttcaaggcagtcgtctcgggcaagcagaagctcgcctcgtccggcccg
gcagtgaagcgtggcagcggcgccaccaccacggcggccaagaagacgactccggccaag
aagaccacggccgcgaagaagacgacgccggccaagaagaccacggccgccaagaagacg
actccggccaagaagaccacggccgccaagaagacgacgccggccaagaagaccacggcc
gccaagaagacgacgccggccaagaagaccacggccgccaagaagaccacgaccccggcc
aagaagaccacggccgccaagaagtcgaccggcaccgcggccaagaagaccacggcgaag
aagacgacggcagccaagaagtcgacccgtcgctga
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integrated database retrieval system
