Gordonia otitidis: LK459_19420
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Entry
LK459_19420 CDS
T07915
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
goi
Gordonia otitidis
Pathway
goi00470
D-Amino acid metabolism
goi00550
Peptidoglycan biosynthesis
goi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK459_19420 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LK459_19420 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
goi01011
]
LK459_19420 (murD)
Enzymes [BR:
goi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LK459_19420 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
goi01011
]
Precursor biosynthesis
Amino acid ligase
LK459_19420 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
NAD_binding_7
Asp_protease_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
UEA58691
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Position
4232470..4234131
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AA seq
553 aa
AA seq
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MSSMTELHLHGRRVVVAGGGTAGMSAARFLLGVGAVVTIADDRFADSTPHPGTGKSADVT
TGVAGSEVTTGVVGADAVKAAGARLTSVAALLVDDAWAATTDLVIASPGFAPGNPLMVAA
AEHEIPVWGEVELAWRVDRGGLAGEPRTWLVVTGTDGKTTTTSMLTDIVIEGGRSAAACG
NIGLPVLDAMTSEPRVDVLCAELSSFQLHWAPSITPDAGVVLNVADDHLDWHGSFAAYAA
DKQTALRGAVGVVGLDDAVASGLPVAGRRVGFTLGEPAPGELGVVDGDLVDRAFTVRAST
DRASTDRADDRRGHTRLVSAESVHPAGPSGVSDALAAAALALAIDIDPSAIGRALSAFRP
AAHRGEVVATVDGIDFVDDSKATNPHAAEAAIGAHTLVVLIAGGLLKGASVDQMIAASAH
RLAGVVAIGRDRDIIVDAISRHAPKVPTVTVFTGDDGSVIAQRALGSETGSAPSGVHPHG
DPGNSGDLATAVMNRAVAEAWTLATATDPRPDAVLLAPAAASLDMFAGYGRRGDAFAAAA
RSLPGNAPRATQP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgatgacggaacttcatctccatggtcgacgcgtcgtcgtcgcgggcggcggc
accgcgggcatgtccgcggcgcgattcctgctcggtgtcggtgccgtcgtcacgatcgcc
gacgaccgcttcgccgacagcacaccgcacccggggacggggaaatcggctgacgtgacg
acgggagtcgcgggatccgaggtgacgacaggagtcgtcggggccgacgcggtcaaggcg
gccggagcacggctcacgtcggtagccgcgctcctcgtcgacgacgcctgggccgcgacc
accgacctcgtcatcgcctcgccgggcttcgcgccgggcaacccgctgatggtcgccgct
gccgagcacgagatcccggtctggggtgaggtcgagctggcgtggcgcgtcgaccgtggc
ggactggcgggcgaaccgcgcacctggctcgtcgtgacggggaccgacggcaagaccacg
acgacgtcgatgctgaccgacatcgtcatcgagggtggtcgcagcgccgccgcgtgcggc
aacatcgggctgccggtactcgatgccatgacgtccgagccgcgggtcgacgtcctgtgt
gccgaactgtcgtcgttccaactccactgggcgccgtcgatcacccccgacgcgggggtg
gtgctcaacgtcgccgacgaccacctcgactggcacgggtcgttcgccgcgtatgccgcg
gacaagcagaccgccctgcgcggtgcggtcggtgtcgtcggactcgacgacgccgtcgca
tccggtctgcccgttgcgggcaggcgcgtggggttcaccctcggcgagcccgcgcccggc
gaactcggcgtcgtcgacggcgacctggtggaccgtgcgttcaccgtccgtgcgtccacc
gaccgtgcgtccaccgaccgtgccgacgatcggcggggccatacacggctcgtgtcagcg
gaatccgttcaccctgcgggaccgtcgggtgtctccgacgcactggccgcagcggctctc
gcactggcgatcgacatcgacccgtcggcgatcggtcgagcgctgagcgcgtttcgtccc
gctgcccaccgcggcgaggtggtcgccaccgtcgacggaatcgacttcgtcgacgattcg
aaggccaccaacccgcacgcggctgaggccgcgatcggcgcacacacgctggtggtgctc
atcgcgggcggattgctgaagggcgcgtcggtcgatcagatgatcgccgcgtccgcgcac
cggctcgctggggtcgtcgcgatcgggcgagaccgcgacatcattgtcgacgcgatttcg
cgacacgccccaaaagtcccaacagtcacagtattcacaggagacgatggcagcgtgatt
gcacagcgcgccctcggatcagaaacgggttcagcgccgagcggggttcacccgcacggc
gaccccgggaactccggcgacctcgcgaccgcggtgatgaaccgcgccgtcgcggaggcg
tggacgctggccacggccaccgatccgcgtcccgacgcggtgctcctcgcgcctgcggcg
gcctcgctggacatgttcgccgggtacggacgacgtggtgacgccttcgcggccgccgcg
cgctcgttgccggggaacgctccccgggcgacacaaccgtga
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