Gordonia otitidis: LK459_20595
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Entry
LK459_20595 CDS
T07915
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
goi
Gordonia otitidis
Pathway
goi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LK459_20595 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_20595 (recC)
Enzymes [BR:
goi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LK459_20595 (recC)
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LK459_20595 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UEA58902
LinkDB
All DBs
Position
4503291..4506725
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AA seq
1144 aa
AA seq
DB search
MLTVHRAERSDTLADALADVLRVPLADPMATEVIAVPARGVERWLTQHLATTLGAQSGRA
DGIAANIDFLSPSAVSGAVVDAVRGRPRANGGAYGRPDPWEPGRMVWQVLAVLDETVDDP
ALEVLARHIGAAENVTADNDLRAGRRFATARHLADLFDRYGRQRPAMLVEWARAHDTDGT
GVPLADDMAWQPRFWRSVNDRIDDDHPALLLEDVCTRVRSDPDAVDLPQRLSVFGATRIP
EAFRQIVAALATHRDVHIFLPHPSPALWASVEHSGVAAVTPLDSRNAGQVPRRADRPIPA
ITHPLLAGLSRDVQELQQRIAPVVDEDIHHEAHFGRDDTSPSLLRRLQLDLRDDTVHAAS
AASDRSLEIHACHGAERQVEVMRDRLLHLFADDKTLEPRDVVIMCPDVESFAPLIRGAFG
QPGLGHPAFDLRVRLADRGPRQINPVLDVVASTVELAAGRAAAGDVIDLLGRPAVRSRFA
MSDDDLDMVREWLSHSNIRWGLDPGERARFGLSGFRQGTFASGVDRIALGAVAEEADGEW
LGTALPLAGVESTEIDLVGRFTEFVDRLETLVDRMSQRASRAAWQRTLIDVVDQLTLAGP
GEEWQRAQAVRLITDALDADTSDTGDLLLADIRDLMAGVVAGRPTRANFRTGELTVCTMV
PMRSVPHRVVVLLGVDADTFPRAQRTDGDDVLGRDPLVGERNPRDEDRQLFLDAIGAARD
ALLVFYNGADPVSGSRIPPAVVVSELAESVATLRGVDDPSEVVINHTLHGFDRLNFIPGA
IGSITTPFSFDAELLAGAKALDAEQMPSPRLSDAAIPAAEPADIELRDLVAFVTNPIEGF
VRQRLGARMPDDDRPHADELDIELDALDKWGVGDRFLTRMLAGDDLVSCQAAELRRGNLP
PYEFGRRELTDISDTVSRVYDAVAAVRTQPPVTRDVVVTLGDGRRVHGSISDIVEESPLG
TTIVTATYSRVRAKQRMTAWLGLLLLAAAGDSGEAEPPTALVVGRGGAGSVAQSMLTAPD
DARAVLHDLVRLRDLGMRAPLPLPLEPAQEYAVKLRAGVRPEAALESARTSFDGMFGAST
DTYLRFVFGSDVTTSIAFDEILATPLPADRRVGELALPGEPGEPLFTGLARMLWEPLLDH
ETAS
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
gtgctcacagtccatcgcgcagaacgtagcgacaccctggcagacgcgctcgccgacgta
ctgcgggttccgctcgccgacccgatggcgaccgaggtcatcgcggtaccggcgcggggt
gtcgaacgatggctgactcagcacctcgcgactacgttgggcgctcaatccggtcgtgcc
gacggcatcgccgcgaacatcgacttcttgtcgccgtctgctgtgagcggggctgtcgtc
gacgccgtacgcggtaggccgcgtgccaacggtggcgcatacggacgacctgacccgtgg
gaaccggggcggatggtctggcaagtgctcgcggtactcgacgagacggtcgacgacccg
gcactcgaagtcctcgcccgacatatcggcgccgcagagaatgtgaccgccgacaacgac
ctccgtgccggtcgacgcttcgccacggcacgccacctcgccgatctcttcgaccgttac
ggccgtcagcggcccgccatgctcgtggagtgggcgcgcgcccacgacaccgacggcacg
ggtgtccctctcgccgacgacatggcgtggcagccgcgcttctggagatcggtgaacgac
cgtatcgacgacgaccatcccgcactactcctcgaggacgtgtgcactcgcgtgcgctcc
gaccccgatgccgtcgacctgccacaacgactcagcgttttcggtgcgacccgcataccc
gaagcgtttcggcagatcgtggcggcgctcgcgacccatcgtgacgtgcacatcttccta
ccccatccctcgccggctctgtgggcgtcggtggagcactcgggcgtcgccgcggtgaca
ccgctggactcacggaatgccgggcaggtaccccgccgggccgatcgcccgatcccggcg
atcacccacccgctgctcgcgggactgtcccgcgacgtgcaggaactacagcaacggatc
gctccggtcgtcgacgaggacatccatcacgaggctcacttcgggcgggatgacacatcg
ccgagcctgctgcgtcgtctccaactcgatctgcgcgacgacaccgtgcacgcggcgagc
gctgcgtcggaccggtcgctggaaatccacgcctgtcacggcgctgaacgtcaggtcgag
gtcatgcgggacaggcttctgcacctgttcgccgacgacaaaaccctcgaaccgcgcgac
gtggtgatcatgtgtcccgacgtcgaatcgttcgcgccgttgattcgtggcgcattcggc
caaccgggcctcggccatcccgcgttcgacctcagggtccgactcgccgaccgtggacca
cgccagattaatccggtcctcgacgtggtcgcctcgacggtcgaactcgcggcaggtagg
gcagcggcgggtgacgtcatcgacctgctcggtcgtccggcggtccgatcgcgattcgcg
atgagtgacgacgacctcgacatggttcgagaatggttgtcgcacagcaatatccgctgg
ggtctcgatccgggggagcgggcacgattcggattgtccggctttcgtcagggcacgttc
gccagtggcgtcgaccggatagctctcggagccgtggcagaggaagccgacggtgagtgg
ctgggcaccgctcttccgctggcgggcgtcgagagcaccgagatcgacctggtcggcaga
ttcaccgagttcgtggatcggctcgagacgctggtcgatcggatgtcgcagcgcgcgtca
cgtgccgcatggcagcgcaccctcatcgatgtcgtcgaccagctcactctcgccggtccg
ggggaggagtggcaacgggcacaggcggtccgactgatcaccgacgctctcgacgcggat
acctccgacaccggggatctgttgctggccgacatccgcgacctcatggccggggtcgtc
gcgggaaggcccacgcgcgccaacttccgtaccggcgaactcaccgtgtgcaccatggtg
cccatgcggtcggtgccacacagggtggtcgtcctcctcggggtggacgccgacacattc
ccgcgggcacagcgcaccgacggcgatgacgtcctcgggcgcgacccgctggtcggcgag
cgcaacccccgcgacgaggaccgtcagctgttcctcgatgccatcggggccgcgcgcgat
gccctgctcgtgttctacaacggggccgacccggtgagcggaagccgcatcccgcccgcg
gtggtcgtcagcgaactcgccgagagtgtcgccaccctgcgtggagtcgacgacccttcc
gaggtcgtcatcaaccacacgcttcacggcttcgatcggctgaacttcatcccgggggcg
atcgggtcgatcacgacaccgttcagcttcgatgccgaactgttggccggcgccaaggcg
ctcgacgcagagcagatgccgtcgccgcgactgtcggacgcggctatcccggcagccgaa
cccgccgacatcgagctgcgcgacctcgtcgcattcgtgaccaatccgatcgaggggttc
gtgcgccaacgactcggggcacgcatgcccgacgacgaccgtccgcacgcagacgagctc
gacatcgaactcgatgcgctggacaagtggggcgtcggagaccggttcctcacacgcatg
ctcgcaggcgacgacctcgtctcctgtcaggcggccgaactgcgccgaggcaatctgcca
ccctacgaattcgggcggcgcgaactgaccgacatctccgacaccgtctccagggtgtac
gacgcggtcgcggcagtgcgcacacagccgcctgtcacgcgcgatgtcgtcgtcaccctg
ggtgacggtcgtcgagtgcacggaagtatttccgacatcgtcgaagagtcgccgctgggc
accaccatcgtcaccgcgacctactcacgggtgcgcgcaaaacagcgcatgacggcgtgg
ctcggtttactgctcctcgccgcggcgggcgattccggtgaggccgaaccgccgaccgcg
ctggtcgtcggccgcggcggtgccgggtcggttgcccagtcgatgctcaccgcccccgac
gatgcgcgtgcggtgctccacgatctcgtccgcctacgcgatctcgggatgcgcgcgccg
ctcccgctgccgctcgagcccgcgcaggagtatgcggtaaagctgcgcgcgggagtgcgc
ccggaggcagcgctggagagcgcgcgcacgagtttcgacggcatgttcggcgcgagcacc
gatacctacctgcgcttcgtgttcggatccgacgtcacgacgtcgatcgccttcgacgag
atactggccacgccattgcccgccgaccgccgcgtgggagaactcgccctgcccggtgaa
ccaggtgagcccttgttcacgggcctcgctcgcatgctctgggagccactcctcgaccac
gagaccgcgtcatga
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