Gordonia otitidis: LK459_22375
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Entry
LK459_22375 CDS
T07915
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
goi
Gordonia otitidis
Pathway
goi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LK459_22375 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goi03400
]
LK459_22375 (ruvB)
Enzymes [BR:
goi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK459_22375 (ruvB)
DNA repair and recombination proteins [BR:
goi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LK459_22375 (ruvB)
RecFOR pathway proteins
LK459_22375 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
IstB_IS21
nSTAND3
AAA_14
RNA_helicase
AAA_3
Resolvase
Zeta_toxin
AAA_18
HTH_AsnC-type
AAA_33
TsaE
AAA_25
Sigma54_activ_2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UEA59218
LinkDB
All DBs
Position
complement(4956876..4957958)
Genome browser
AA seq
360 aa
AA seq
DB search
MNSDEPIEREVNATPVRSDGDLDAGLRPRSLADFIGQPRVCEQLELVLHGARGRGGTPDH
ILLSGPPGLGKTSLAMIIAAEMGAAIRVTSGPALERAGDLAAMLSNLVEGDVLFIDEIHR
IARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGSLTGPLRDRFGF
TAHMEFYETDELVRVLRRSAGILGIDLGGDAASEIASRSRGTPRIANRLLRRVRDYAEVR
GDGVVTVDIARAALAVYDVDELGFDRLDRAVLNALIKAFGGGPVGVSTLAVAVGEEPATV
EEVCEPFLVRAGMIARTPRGRVATAAAWHHLGLTPPAGALNATFGVRPRDTDAETLFDDL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgacgaaccgattgagcgcgaggtcaacgcgaccccggtgcgctccgatggc
gacctcgacgcaggtctgcgcccgcggtcgctggccgacttcatcggacagccgcgcgtg
tgcgaacagctcgaactcgtgctgcacggtgcccggggccgtggcggcacgcccgatcac
atattgctgtcgggtccgccaggtctgggtaagacgtcgctggccatgatcatcgccgcc
gagatgggggctgccatcagggtgacctcgggtccggcgctcgagcgcgccggcgacctc
gcggcgatgctctcgaatcttgtcgagggcgacgtgttgttcatcgacgagatccaccgc
atcgcgcggcctgcggaggagatgctctatctggccatggaggacttccgtgtcgacgtc
gttgtaggcaaggggccgggtgcgacgtcgatcccgctcgacgtcgcaccgttcacactc
gtcggggcgacgacgcgctcgggctcgctgaccggtccgctgcgagacaggttcgggttc
accgcgcacatggagttctacgagacggacgagctcgtccgggtgctgcgccgttcggcc
gggattctcggcatcgacctcggcggcgacgccgcgtccgagatcgcgagtcgttcgcga
ggtaccccacgtatcgcgaaccgactgctgcggcgtgtacgtgactacgcggaggtgcgg
ggcgacggcgtcgtcaccgtcgacatcgcccgggcagcgcttgccgtgtacgacgtcgac
gaactcggcttcgaccgactcgatcgcgcggtactcaacgcgctgatcaaggcgttcggg
ggcggtcccgtcggcgtgtcgacgctggccgtcgccgtcggagaggaaccggccaccgtc
gaagaggtgtgtgagccgttcctcgtgcgggccgggatgatcgccagaaccccacgcggg
cgcgttgcgacagcggccgcgtggcatcacctcggactcaccccgcccgctggtgcgctc
aacgcaactttcggcgttcgtccgcgtgacacagacgccgaaacactgttcgacgatctc
tga
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