Gordonia otitidis: LK459_22425
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Entry
LK459_22425 CDS
T07915
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
goi
Gordonia otitidis
Pathway
goi00750
Vitamin B6 metabolism
goi01100
Metabolic pathways
goi01240
Biosynthesis of cofactors
Module
goi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LK459_22425 (pdxS)
Enzymes [BR:
goi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LK459_22425 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NanE
NMO
IGPS
TetR_C_27
Glu_synthase
DHO_dh
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
UEA59227
LinkDB
All DBs
Position
complement(4964766..4965728)
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AA seq
320 aa
AA seq
DB search
MSQFRSGETSATETTPSVNGHAAADSQAGQGTARVKRGMAEMLKGGVIMDVVTPEQAKIA
EDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIINTVSIPVMAKARIGHFVEAQILQ
SLGVDYVDESEVLTPADYSNHIDKFAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGT
GDVSNATTHMRSIRDQIRRLTSLPKDELYVAAKELQAPYDLVVEVANAGKLPVTLFTAGG
IATPADAAMMMQLGAEGVFVGSGIFKSGNPAQRAAAIVQATTFYDDPDVLAKVSRGLGEA
MVGINVDDIPQPHRLAERGW
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaattccggtcaggggagacgtctgcgacggagacgacaccgtcggtcaacgga
cacgccgctgccgactcgcaggcaggtcagggcactgcgcgcgtcaagcgcggtatggcc
gaaatgctgaagggcggcgtgatcatggatgtcgtcacgcccgagcaggccaagatcgcc
gaggacgccggggcggttgccgtcatggcgctcgaacgtgtgcccgccgacatccgcgca
cagggcggcgtgtcgcgtatgagcgaccccgacatgatcgacggcatcatcaacaccgtc
agcatccccgtgatggccaaggcccgcatcggtcacttcgtcgaggcgcagatcctgcag
agcctcggcgtcgactacgtcgacgagtccgaggtgctcacgcccgccgactactccaac
cacatcgacaagttcgcgttcaccgtgccgttcgtctgcggcgcgaccaacctcggcgag
gcgctgcgacgtatcaccgagggggcggcgatgatccgctcgaagggcgaagcaggcacc
ggcgacgtctccaacgcgacaacccacatgcgcagcatccgcgaccagatccggcgcctc
acctcgctgccgaaggacgagttgtacgtcgcggcaaaggaattgcaggcgccgtatgac
ctggtcgtcgaggtggcgaacgcagggaagctgcccgtgaccttgttcaccgcgggcggg
atcgccaccccggccgatgccgcgatgatgatgcaactcggcgcggagggcgtgttcgtc
ggttcgggcatcttcaagtcggggaacccggcgcagcgcgccgcggcgatcgtgcaggcc
acgacgttctacgacgacccggacgtgctcgcgaaggtgtcgcgcggactcggcgaggcg
atggtcggcatcaacgtcgacgacatcccgcagccgcaccgtctcgccgagcgcggctgg
tag
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