Gordonia otitidis: LK459_22815
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Entry
LK459_22815 CDS
T07915
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
goi
Gordonia otitidis
Pathway
goi00300
Lysine biosynthesis
goi00470
D-Amino acid metabolism
goi01100
Metabolic pathways
goi01110
Biosynthesis of secondary metabolites
goi01120
Microbial metabolism in diverse environments
goi01230
Biosynthesis of amino acids
Module
goi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LK459_22815 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK459_22815 (dapF)
Enzymes [BR:
goi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LK459_22815 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UEA59292
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Position
complement(5044435..5045334)
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AA seq
299 aa
AA seq
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MTTISEAVTYVKGHGTQNDFVVLTDPAVDLDLTVDFVAAVCDRQRGVGADGMLRVARAVA
LVRAGVIDELPADVEPDDWFMDYRNADGSIAEMCGNGVRVFAHHLRASGLVDSDEFTVGS
RAGARPVVVHSFDELHADVSVQMGPVTMGADATVRIGDDLYPGVAVDVGNPHLACVVPDM
SVDDLGAVDFSTGVLLPDDTFPHGANVELLTAPDGGADHLHATMRVFERGVGETRSCGTG
LVAAAAAALRTLDRDAGEMVIDVPGGRVSITLANGRATLRGPSALVADGRLRAGWYRVD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgatcagcgaggcagtgacctacgtcaagggacacggcacacagaacgacttc
gtggtgctcaccgacccggcggtcgacctcgatctgaccgtcgatttcgtcgctgcggtc
tgcgatcggcaacgcggtgtgggcgccgacggcatgctgcgcgtcgcgcgggcggtggca
ctggtgcgcgccggcgtgatcgacgagctaccagccgacgtcgaacccgacgactggttc
atggactatcgcaatgccgacggttccatcgcggagatgtgcggcaacggggtgcgcgtg
ttcgcgcaccacctacgggcgagcggactggtcgactccgacgagttcaccgtcggctca
cgagccggtgcgcgaccggtggtggtgcattcgttcgacgagctgcacgccgacgtcagt
gtgcagatgggccctgtcacgatgggtgccgatgccaccgtgcgcatcggtgacgacctc
tacccgggagtcgccgtcgacgtcggcaacccgcatctggcctgcgtggtccccgacatg
tcggtggacgacctcggtgctgtcgacttctccacaggtgtcctgctgcccgacgacacg
ttcccgcacggcgcgaacgtcgaactgctcaccgcacccgacggcggtgcggatcacctg
cacgcgacgatgcgtgtcttcgaacgcggcgtcggggagacgaggagttgcgggaccggc
ttggtcgcggctgcggcggctgcgctgcgcacgctcgaccgtgacgcgggcgagatggtc
atcgacgtgcccggagggcgggtgtcgatcactctcgcgaacggtcgggcaaccctgcga
ggaccttctgctctcgtcgccgacggccggctgcgcgcggggtggtaccgcgtcgactga
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