Gordonia otitidis: LK459_22840
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Entry
LK459_22840 CDS
T07915
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
goi
Gordonia otitidis
Brite
KEGG Orthology (KO) [BR:
goi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goi03016
]
LK459_22840 (miaB)
Enzymes [BR:
goi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LK459_22840 (miaB)
Transfer RNA biogenesis [BR:
goi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LK459_22840 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UEA59296
LinkDB
All DBs
Position
complement(5049522..5051108)
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AA seq
528 aa
AA seq
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MRRFAPHRTLDPVSTELSERHELPQSRRSYQVRTYGCQMNVHDSERIAGLLEDAGYVRAD
DDGDADLVVFNTCAIRENADNKLYGNLSHLAPVKTRRPGMQIAVGGCLAQKDKDTVLRKA
PWVDVVFGTHNIGSLPALLDRARHNEEAQVEILDALEAFPSTLPAKRDSAYSGWVSVSVG
CNNTCTFCIVPSLRGKEVDRRPGDVLAEVGALVDQGVLEVTLLGQNVNAYGMSFADPDMP
RNRGAFAELLRACGDIEGLERVRFTSPHPAEFTDDVIDAMAQTPNVCPQLHMPLQSGSDR
ILRAMRRSYRTTKFLGILDKVRDAMPHAAITTDIIVGFPGETEEDFAATLDVVERARFSS
AFTFQYSPRPGTPAASMPDQVPPEVVSERYQRLIALQERICLAENRNLVGSDAELLVVAD
SGRKSADTGRMTGRSRDGRLVHFRAGDAAASIRPGDVVVTTITDAAPHHLMADGAIASHR
RTRAGDAHELSRTPTTAPVGVGLGMPGIGPVATPEVTATGCASGACGA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatttgcgccgcaccgtaccctggatccagtgagtacggagttgtcggagcgg
catgagctgccccaatcgcggcgcagctatcaggtgcgcacgtatggctgccagatgaac
gtgcatgattccgagcgcatcgcgggtctgctcgaagacgccgggtatgtgcgcgcggac
gacgacggcgacgccgatctcgtcgtgttcaacacgtgtgcgatccgcgagaacgccgac
aacaagctgtacgggaacctctctcatctcgcgccggtgaagacccgccgaccagggatg
cagatcgctgtcggtggatgtctggcgcagaaggacaaggacacggtgttacgtaaggcg
ccgtgggttgacgtggtgttcggcacgcacaacatcggatcgctgcccgcgttgctggac
cgggcgcgccacaacgaggaggcgcaggtcgagatcctcgacgccctcgaggcctttccg
tcgacgctgccggcgaaacgcgactccgcctactcgggctgggtgtcggtgtcggtgggc
tgcaacaacacctgcaccttctgcatcgtcccgtctctgcgcggtaaggaagtcgatcgg
cggccgggggacgtgctcgccgaggtcggggcgctcgtggatcagggcgttctcgaggtg
acactgctcggtcagaacgtcaacgcgtacggcatgtcgttcgccgatcccgacatgccg
cgcaaccgcggcgccttcgccgagctgctgcgcgcctgcggcgacatcgaggggctcgaa
cgggtccgtttcacttctccgcatccagccgagttcaccgacgacgtgatcgacgcgatg
gcgcagacccccaacgtgtgcccgcaactgcacatgccgttgcagtcgggctccgaccgc
atcctgcgggcgatgagacgcagctatcgcaccaccaagttcctcggcatcctcgacaag
gtgcgcgatgccatgccgcacgcggcgatcaccaccgacatcatcgtcgggttccccggc
gagaccgaggaagacttcgccgcaacactcgacgtggtcgagcgcgctcgtttctcgagt
gcgttcaccttccagtactcgccgcgaccgggcactccggcagcatcgatgcccgatcag
gttccgcccgaggtggtcagtgagcgttatcagcgactgatcgcactccaggagcgcatc
tgtctcgccgagaaccgcaatctcgtcggttccgacgccgaactgctggtcgtcgccgat
tcgggacgcaagtccgccgataccggacggatgacagggcgttcgcgcgacggacgactc
gtgcacttccgcgcaggcgacgctgccgcgagcatccggccgggcgacgtcgtcgtcacg
acgatcaccgacgccgcaccgcatcatctgatggccgatggcgcgatcgcgtcgcatcgg
cggacacgggcgggcgacgcacacgaactcagccgcacgccgacgaccgcaccggtcggt
gtcggtctcgggatgcccgggatcggcccggtggccacacctgaggtgacggcgacgggg
tgcgcttcgggtgcgtgtggtgcatga
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