Gordonia sp. JH63: GR168_01110
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Entry
GR168_01110 CDS
T10304
Symbol
lysX
Name
(GenBank) bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
goj Gordonia sp. JH63
Pathway
goj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GR168_01110 (lysX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
goj01007
]
GR168_01110 (lysX)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goj03016
]
GR168_01110 (lysX)
Enzymes [BR:
goj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GR168_01110 (lysX)
Amino acid related enzymes [BR:
goj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GR168_01110 (lysX)
Transfer RNA biogenesis [BR:
goj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GR168_01110 (lysX)
Prokaryotic type
Other AARSs
GR168_01110 (lysX)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
MASE3
Motif
Other DBs
NCBI-ProteinID:
QHD84160
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All DBs
Position
243691..247104
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AA seq
1137 aa
AA seq
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MATDTPLAPVDPENLGEHRDVGPRTPTAADRRSLALLDKIRRPSGFGSRAPHIAGTIVGV
LAAIALLSSLFPAIRHLIHDPRRYVDDYLITLPDTSFAWAFVLALIAVALSARKRIAWWI
SVIYLILFMATNALYLVPSLADDLGVTRWDRTNIYLGLFIDALALMFLLSTYRQFYTRVR
RGAVLAAFGTLVAGLAIATLLGWALVWAFPHTLTRGDRLPYAFNRVVAFGAIDQDASFDG
RHTHLFVNGLLGLFGALALIAAAVVLFRSQRLRWLITAEDEALIRALITRFNDDDSLAYF
STRRDKAVVFSPDGRAAITYRVEVGVGLAGGDPIGDPESWPDAIAEFLTLCEKYGWHPAS
MGSSPRGAAAFDAAGFVSLNIGDEAILHTREFSLSGPAMKAVRQAVTRTRRAGVGVRIRR
HNEIGDTEMAQIVARADDWRDTDEERGFAMALSRIGDPADGDCLLVEAVMDEGTPGERVV
GMLSFVPWGRRGVSLDLMRRDRHGPNGVVETMVAELCRNSEQLGITQVSLNFAAFRAFFE
QGPQIGAGPVMRMGYSILMFGSRFFQMESLYKSNAKYLPDWQSRYLCFEDSRILPRVGLA
AIVTEGFITLPRFGRAKHYTQGPPSIPPGVNAPALIAELDAEAATPEGAVVHRPEQVRVR
LEKMDRLVERGFDPYPPADQPTHTIAAAKAEPEGTVVTVAGRVTRLRDFGKVVFADVHDW
SGEVQVLVEDSRIIPGTPDFGTDVDLGDLIQARGVVGTSRKGELSILIDAWRINGKCLRP
LPDKWAGLTDPEARVRQRYVDLAINEQTRASLATRSLVVKSLRDFLSARGYLEVETPILQ
QIHGGANATPFQTHINAYNLDLYLRIAPELYLKRLCVGGVEKVFEIGRNFRNEGVDFSHN
PEFTSLEAYEAHSDYLKMLDLTREMIQYAATAAYGEPVIVRTDADGNEERVDISGEWPVK
TVHQVVSEGAEQEITPETSVEELRAVCDRLDINHRPDWDAGQIVLELYEHLGEDRTTFPT
FYTDFPTSTSPLTRAHRSKPGVAERWDLVAWGVELGTAYTELTDPVEQRARLTEQSILAA
DGDPEAMELDEDFLQALEYAMPPTGGLGVGVDRVVMLITGQSIRESLAFPLAKPQDA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacacccccctcgcgccggtcgaccccgagaatctcggcgagcaccgcgac
gtgggaccgcggacgcccaccgcggccgaccgcaggtccctcgcgctgctcgacaagatc
cgacggccctccgggttcgggtcccgcgccccgcacatcgccggcacgatcgtcggtgtc
ctggcggcaatcgcgttgctgtccagcctcttcccggcgatacggcatctgatccacgac
ccccgccgctacgtcgacgactacctcatcaccctccccgacaccagcttcgcctgggcg
ttcgtgctcgccctcatcgccgtcgcgctctcggcccgcaagcggatcgcctggtggatc
agcgtcatctacttgatcctgttcatggcgaccaacgcgctctatctcgtgccgtcgctg
gccgacgacctgggcgtgacgcggtgggaccgcacgaacatctacctcggactgttcatc
gatgcgcttgccctgatgttcctgctgtcgacgtaccgccagttctacactcgggtccgc
agaggcgccgtgctggcggcgttcggcaccctggtcgccggactggcgattgcgacgctg
ctgggctgggccttggtgtgggcgttcccgcacacgctgaccaggggcgaccggttgccg
tacgcgttcaaccgggtcgtggcgttcggcgccatcgaccaggatgcctcgttcgacggt
cggcacacccacctgttcgtgaacggtctgctgggactgttcggcgcgctggcgctgatc
gccgcggccgtcgtgctgttccggtcgcaacggctgcgctggctcatcaccgccgaggac
gaagccctcatccgggcgctgatcacgcgattcaacgacgacgattcgctcgcgtacttc
tcgacccgtcgcgacaaggccgtcgtcttctcgcccgatggtcgggcagcgatcacctac
cgggtggaggtaggagtcggactggcgggtggtgacccgatcggcgacccggagtcgtgg
ccggatgccatcgccgaattcctcaccctgtgcgagaaatacgggtggcatccggcgtcg
atggggtcgagcccgcgtggcgcggccgcctttgacgccgccggtttcgtctcgctcaac
atcggcgacgaggccatcctgcacacgcgcgagttcagcctcagcggcccggccatgaag
gcggtgcgccaggccgtgacccgcacccgccgtgccggggtcggcgttcgcatccgacga
cacaacgagatcggcgacaccgagatggcgcagatcgtcgcgcgcgccgacgactggcgc
gacaccgacgaggaacgcggcttcgcgatggcgctctcgcgcatcggcgatcccgccgac
ggcgactgcctgctggtcgaggccgtgatggacgagggcacccccggcgagcgggtcgtc
ggcatgctgtccttcgtgccctgggggcgccggggtgtctcgctcgacctgatgcgtcgt
gaccggcacggacccaacggcgtcgtggagacgatggtcgccgagttgtgccgtaactca
gagcaattgggcatcacccaggtgtcgctgaacttcgcggcgttccgggcgttcttcgag
cagggtccccagatcggggccgggccggtgatgcggatgggctactcgatcctcatgttc
ggctcgcggttcttccagatggagtcgctgtacaagtcgaatgcgaagtatctgccggac
tggcagtcgcgctacctgtgcttcgaggacagccggatcctgccccgggtgggcctagcc
gcgatcgtgaccgagggtttcatcacgttgccgcgcttcggacgggccaagcactacacg
caggggccgccgtcgatcccgcccggtgtcaacgcgcccgcgctcatcgccgagctcgac
gccgaggcagccacacccgagggtgcggtcgtccaccggccggaacaggtgcgcgtccga
ctcgagaagatggaccggctcgtcgagcgcggcttcgatccgtacccgccggccgatcaa
cccactcatacgatcgcggcggccaaggccgaacccgagggaaccgtcgtcaccgtcgcc
ggacgcgtgacgcgacttcgggacttcggcaaagtggtgttcgccgacgtccacgactgg
tccggcgaggtgcaggtgctggtcgaggattcccggatcatcccaggcacacccgatttc
ggtaccgacgtcgacctcggggatctgatccaggcccgcggcgtcgtcggcacgagtcgg
aagggtgagctgtcgatcctgatcgacgcctggcggatcaacggcaaatgcctgcgtccg
ctacccgacaaatgggccggcctcaccgatccggaagcgcgtgtccgccagcgctatgtc
gacctggcgatcaacgagcagacgcgagcatcgctcgccacccgcagcctcgtcgtgaag
tcgttgcgcgacttcctctccgcgcgcggctacctggaggtggagacgccgatcctgcaa
cagatccacggcggcgcgaacgccaccccgttccagacgcacatcaacgcctacaacctc
gacctgtatctgcggatcgccccggagctctacctcaaacgactgtgtgtcggcggggtc
gagaaggtcttcgagatcggccgcaacttccgcaacgagggtgtggacttcagtcacaac
ccggagttcacgagtctggaagcctatgaggcgcacagtgattacctcaagatgctcgac
ctgacacgagagatgatccagtacgcggcgacggcggcctacggggaaccggtcatcgtg
cgcaccgacgccgacggaaacgaagagcgcgtcgacatctccggggagtggccggtcaag
accgttcatcaggtcgtctcggagggcgcggagcaggagatcaccccggagacgtctgtc
gaggagctgcgcgcggtatgtgaccgcctggatatcaatcaccggcccgactgggacgcc
gggcagatcgtcctggaactgtacgagcacctcggtgaggatcgcaccaccttcccgacc
ttctacaccgacttcccgacgtcgacgtcacccctcacgcgtgcgcaccggagcaagccc
ggcgtcgccgagcggtgggacctcgtcgcctggggggtcgaactcggtacggcctacacc
gaactgactgatccggtggagcagcgggcacgcctcaccgagcagtcgatcctggccgcc
gacggcgatccggaggccatggaactcgacgaggacttcctgcaggcactggagtacgcg
atgccgccgaccggaggtctgggtgtcggcgtcgaccgggtggtcatgctcatcaccgga
cagtcgatccgcgagtcgctcgcgttcccgctggcgaaaccgcaggacgcctga
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