Gordonia sp. JH63: GR168_01520
Help
Entry
GR168_01520 CDS
T10304
Name
(GenBank) arabinosyltransferase
KO
K11385
arabinosyltransferase A [EC:2.4.2.-]
Organism
goj Gordonia sp. JH63
Pathway
goj00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
GR168_01520
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
goj01003
]
GR168_01520
Glycosyltransferases [BR:
goj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GR168_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
QHD87951
LinkDB
All DBs
Position
complement(343292..346558)
Genome browser
AA seq
1088 aa
AA seq
DB search
MAVVAGVLTPFLPVSTSTASITWPQQTGTSASVTAPLVAQTARNVDISIPCRVLSTTPAD
TSTVVLSTMPAAAVKARDNGLFVVADANGVSVTNRNKTLASVPRDALAGCTELRIFSDAT
TTGAQFVGLPPGPAIAGGGAVGLAEPASNPQIAGIFTDLTPEQLRAAPGVDVRLEIDDRF
DSSPSILKWVVMVVGVGAAIVALVAVGRLDRIHGYHRRVGRRLRWRRVLRPGPTDIGVTV
TLVVWHFLGAGSPDDGYILNMGRNAADAGYLANYYRFYGIPEAPFDWYYNFLAYWSTIST
TGLWMRLPSLFAGLAAWFILSRVLLPRLGGAVRRSQWAMLTGAAVFLAFWLPMCSGLRSE
GIIVLGTLATWWAVEVTVSTRRMLPAVIAAFTAALTLALAPHGLVALALLIASARPMLRI
LVRRRAEDGLLPLLAPLLAGVALVVIIVFRDQTLATVFEALRIRYSVGPTLAWYQELLRY
YFLAVNTTDGALARRIPVLLFAVSMFVVLAIMLRRKRIDGLDPGAVWRALGASLLTILFL
SFTPTKWTIQFGIFAGLGAALAAVACVAIGQAARRTLRNLSILVAGLLVACAAAAAGKNA
WPWPYNFGIAWFDKAPVVAGIQVSTVLLALAVVALLFAIWQHLRMDFVDETGLAHDRGAA
PAGWRIGVASAPIAVIAVLIVVSELAVFAKAATSRADTFTLLSANLDSARGNTCAMADSV
LVEPDPNRGMLTPADGGTASSTLQGQSQGFRPDGVKPDLTPQAGAQKPGAMNTSADLSKT
FIVYGSNPGTTGGVGPRGVNGSTAALPFGLDPATTPVLGSHETNSGQATLTTGWYRLPAR
DSSPLIVITAAGAVFTLDRDGVPNFGQALEVQFGREPEAGAGSEASGPNVPANGQFEEVG
APAIPIDPERTNRPWRNLRIPMDRVPADATVMRIVARDNNLDPDQWLAITPPRAPVLQTL
QTVVGSTDPVLIDFAAGAVFPCQRPMTAHHGVFDLPQWRILPESWIANSQSKTWMATEDG
GLLAPVEALTRPSTLATYLDDDWYREWGNLQRLTPLVPQARPADVQTGTSTTWGWSRPGP
IRVVPEDD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atcgccgtcgtcgccggcgtcctgaccccgttcctgcccgtcagcacctcgacggcgtcg
atcacatggccacaacagaccggcacttcggcatcggtcacggctccgctcgtggcgcag
accgcccggaacgtcgacatctcgatcccgtgtcgcgtgctgtcgacgacccccgccgac
acgtcgaccgtcgtgctgtcgacgatgcccgcggccgcggtgaaagcgcgggacaacggg
ctgttcgtcgtcgccgacgcgaacggcgtatccgtcaccaaccgcaacaagacgctcgcc
tcggtgccgcgggacgcgctggccggttgtaccgaactccgtatcttctccgacgccacg
acgaccggcgcgcagttcgtcggtctgcccccgggaccggcgatcgcgggcggcggcgcc
gtcggcctcgccgaaccggcgtcgaacccgcagatcgccggcatcttcaccgacctcacg
cccgaacagctccgggccgccccgggtgtcgacgtccgcctcgagatcgacgatcgcttc
gactcgtcgccgtcgatcctcaagtgggtggtgatggtcgtcggtgtcggagccgcgatc
gtcgcgctcgtggccgtcggacgcctcgaccgcatccacggctatcaccgacgagtcggc
cggcgcctccggtggcgccgggtcctgcggcccggccccaccgacatcggcgtgacggtg
acgctggtggtctggcacttcctcggggcggggtcacccgacgacggttacatcctcaac
atggggcgcaacgccgccgacgccggatatctcgcgaactactaccgcttctacggcatc
cccgaggcaccgttcgactggtactacaacttcctggcgtactggtcgaccatctcgacg
accggcctgtggatgcggctcccgtcgcttttcgcgggtctggccgcctggttcatcctc
agccgagtcctcctgccccgtctgggcggcgccgtgcggcggtcacagtgggcgatgctc
accggcgcggcggtcttcctcgcgttctggctcccgatgtgttcggggctgcgcagcgag
ggaatcatcgtcctcggcaccctggcgacctggtgggcggtggaggtcacggtctcgacg
cgacggatgctgccggccgtcatcgccgcattcaccgcggcgctgacgctcgccctggcc
ccgcatggtctcgtcgcgctcgccctgctcatcgcgagcgcccggcccatgctccgcatc
ctggtccgacgccgcgccgaagacgggctcctgccgctgctcgccccccttctcgcgggt
gtggcgctggtcgtcatcatcgtcttccgcgaccagaccctggcgaccgtcttcgaggcc
ctgcggatccgttactcggtcggtccgacgctggcgtggtatcaggaactcctgcgctac
tacttcctcgcggtgaacaccaccgacggcgccctggcccgccgcatcccggtgctcctg
ttcgccgtgtccatgttcgtcgtcctggcgatcatgttgcgccgcaagcggatcgacggc
ctcgatccgggcgcggtgtggcgggcactgggcgcctccctgctgacgatcctgttcctg
tcgttcacgccgacgaagtggaccatccagttcggcatcttcgccggcctcggcgcggcg
ctggccgccgtcgcctgcgtggcgatcgggcaggcggcgcgccgcacgctccgcaacctg
tcgatcctggtcgccgggctgctggtggcgtgcgcggccgcggcggcgggcaagaacgcc
tggccgtggccctacaacttcggcatcgcctggttcgacaaggcacctgtcgtcgccggg
atccaggtgtcgaccgtgctcctcgcgctcgcggtggtggcattgctgttcgccatctgg
caacacctccggatggacttcgtcgacgagaccggcctcgcccatgaccgcggtgccgcg
cccgccggctggcgcatcggggtcgcgtccgcaccgatagcggtgatcgccgtcctcatc
gtcgtcagtgaactcgcggtgttcgcgaaggccgcgaccagccgcgcggacaccttcacg
ttgctgtccgccaatctcgactccgcgcgcggaaacacctgcgcgatggccgattccgtg
ctcgtcgaacccgatcccaatcgcggcatgctgacgccggcggacggcggcacggcgtcg
tcgacgctgcagggtcagtcccagggattccgtcccgacggggtgaagccggacctcaca
ccgcaggccggcgcccagaaacccggcgcgatgaacacctccgcggacctgtcgaagaca
ttcatcgtctacggcagcaacccgggaaccaccggcggcgtcgggcctcgcggcgtcaac
ggcagcaccgcggcactgccattcggcctcgatccggcgaccacacccgtgctgggcagc
cacgagaccaacagcggccaggccactctgaccaccggttggtatcgcctgcccgcccgc
gactcctcaccgctgatcgtcatcaccgccgccggcgcggtcttcacgctcgaccgggac
ggcgtcccgaacttcgggcaggcgttggaggttcagttcggtagggagcccgaagccggc
gccgggagcgaagcgagcgggccgaatgttcctgccaacggacagttcgaggaggtcggc
gcgcccgcgatcccgatcgaccccgagcggaccaaccgcccgtggcgaaacctgcgcatc
ccgatggaccgcgttcccgctgacgcgaccgtgatgcgaatcgtcgcccgggacaacaac
ctcgacccggaccagtggctcgcgatcaccccgccgcgggccccggtgctgcagaccctg
cagaccgtcgtcggctccaccgaccccgtgctcatcgacttcgccgccggcgcggtgttc
ccgtgccagcgtccgatgaccgcccaccacggcgtcttcgacctcccgcagtggcgtatc
ctgcccgagtcgtggatcgccaactcgcagtccaagacctggatggccaccgaggacggc
ggcctgctggcgccggtggaggcgctcacgcggccgtcgaccctcgccacctacctcgac
gacgactggtaccgcgagtggggcaacctgcagcgcctgaccccgctggtgccgcaggcg
cgacccgcggacgtgcagacgggaacgtcgaccacctggggatggtcgcgccccggcccg
atcagggtggtgcccgaagatgactga
DBGET
integrated database retrieval system
