Gordonia sp. JH63: GR168_01735
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Entry
GR168_01735 CDS
T10304
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
goj Gordonia sp. JH63
Pathway
goj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GR168_01735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goj03400
]
GR168_01735
Enzymes [BR:
goj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GR168_01735
DNA repair and recombination proteins [BR:
goj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GR168_01735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QHD87956
LinkDB
All DBs
Position
401216..402088
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AA seq
290 aa
AA seq
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MSTGGFTVASFNVNGIRAARRRGFDAWLDGRQPDVVGLQELRCGIDDVGEFDCYHAAVDV
GSVAGRNGVAVLARNEPAAVRTWVTHPPKARGLSAFAHEGRYIEVDLADRPLTVANLYLP
KGGLPAESQRPGSMREVPDGGAKYARKQRFLAGFTRELERNRLAARRAGREFLLLGDLNV
AHLEHDVTNWRAARKMEGFLPEERAWFGEITGPRRLVDVVRALHGDRPGPLTWWSWAGES
FVKDVGWRIDHQLASPALARRARAVMVDKEASPDLRLSDHAPLVVEYAEP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggtggattcaccgttgcgtcgttcaacgtcaacgggatccgggcggcgcgt
cgtcgcggcttcgacgcctggctcgacggacggcagcccgacgtggtcggactgcaggag
ttgcggtgtggcatcgacgacgtcggagagttcgactgttaccacgccgccgtcgacgtc
ggctccgtcgccggacggaacggtgtcgcggtgctcgcccggaacgaacccgccgcggtg
cggacgtgggtgacccatccgcccaaggctcgcggactgtccgccttcgcccacgagggc
cgctacatcgaggtcgatctcgccgatcggccgctgaccgtcgccaacctctacctgccc
aaaggtgggcttccggccgagtcgcagcgccccggctcgatgcgtgaagtaccggacggc
ggcgccaaatacgcacgcaagcaacgctttctggccgggttcacccgtgaactcgagcgc
aaccggctcgccgctcgccgtgccggccgggagttcctgctcctcggcgacctcaacgtg
gcacacctcgaacacgacgtcaccaactggcgcgcggcccgcaagatggagggcttcctg
cccgaggaacgcgcctggttcggcgagatcaccggtccgcgccggctcgtcgacgtggta
cgcgccctgcacggcgaccgtcccggaccgctcacctggtggagctgggcgggagagtcg
ttcgtcaaggacgtcggatggcgcatcgaccaccagctcgcctcgcccgcgcttgcccgg
cgggcacgcgcggtgatggtcgacaaggaggcgtcgccggaccttcggctgtccgatcac
gccccgctggttgtcgagtacgccgagccgtga
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