Gordonia sp. JH63: GR168_03870
Help
Entry
GR168_03870 CDS
T10304
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
goj Gordonia sp. JH63
Pathway
goj03018
RNA degradation
Brite
Enzymes [BR:
goj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GR168_03870
Messenger RNA biogenesis [BR:
goj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GR168_03870
DNA repair and recombination proteins [BR:
goj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GR168_03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QHD84632
LinkDB
All DBs
Position
complement(855079..857199)
Genome browser
AA seq
706 aa
AA seq
DB search
MAATLAPDQLTAANRVITSLAGEGAALRDDQLRAVTALAGRPADPTERGARVLVVQATGW
GKSAVYWSATAIIRAGGGGPTLIVSPLLSLMRDQVAAAARGGLSAATLNSSNVDEWSMIE
AQLRAGDLDVLLVSPERLANPGFGRRVLDALAGNLGLLVIDEAHAVSDWGHDFRPDYRRV
ADVLRTVNPTTPVLATTATANARVTDDVAAQLDAGSGGEPTLVLRGPLARKSLHLNVLDG
LSPVQRYGWVAQSLPSLPGSGIVYVLTVADADRLVEAIRAVHGDAVAVAAYTGQLDADRR
HELEDALLRNEVKALVATSALGMGYDKPDLGFVVHVGSPPSPVSYYQQVGRAGRALDDAV
VMLLASQTDDRIWDHFATATIPDPDKMRDLLAALESAAEPQSVVQLEAATRFRRTRIELM
LKQLAVDGVTDRTADGWVVTGKPWTYDAEHYDGILAVRRREADIMRAYIAGRTCLMRLLT
ESLDDPQAADCGRCSVCRGALSEGLPDSVDAEIVRTVTSTLRRKAQTLDPRKMWPGGEFG
RRGRISADLLAEPGRVLAHADAPEWVEVLAAARNGDERALAELGDAAVATLAAWVRDTGI
RADVIVSLRLTGTVLAETLADHLRKVGKREGGSFPVRMGDPPTDATGAVEAAYWRDHLGD
PPDVAGRAVLLVVDANGSGWPITLAAAALREAGATAVLPLLIHRTV
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaccctcgccccggaccagctgaccgccgccaaccgtgtcatcaccagcctg
gccggtgagggcgccgcgctgcgcgacgaccagctccgggccgtgaccgcactggccggc
cggcccgccgatcccaccgagcgcggcgcccgcgtgctggtcgtccaggcgaccgggtgg
ggcaagtcggcggtctactggtcggcgaccgcgatcatccgggcgggtggcggggggccg
acgctcatcgtgtcaccgctgctgtcgctcatgcgcgaccaggtcgccgccgccgctcgc
ggtgggttgtcggcggcgacgctcaactcgtccaatgtcgacgagtggtcgatgatcgag
gcacagctgcgcgccggcgacctcgacgtgctgctcgtgtcaccggaacggctcgccaat
ccgggcttcggtcgccgggttctcgacgccttggccggcaacctcggcctgctcgtcatc
gacgaagcacatgcggtgtccgactggggtcacgacttccgcccggactaccgccgcgtc
gccgacgtgctgcgtaccgtcaacccgacgacgccggtcctggccaccaccgccaccgcc
aatgcccgcgtcaccgacgacgtcgccgctcagctcgatgccggctccggtggtgagccg
acactcgtcctccgcggaccgctggcgcggaagtccctgcatctcaatgtcctcgacggc
ctctccccagtccagcggtacgggtgggtcgcgcagtcgctgccttcgctgccggggtca
ggcatcgtctacgtgctgaccgtcgccgacgccgaccgcctggtcgaggcgatccgggcc
gtccatggcgacgccgtcgcggtggcggcctacaccggccagctcgacgccgaccgccgc
catgaactcgaggacgcgttgctgcgcaacgaggtcaaggcgctggtcgcgacgtcggcg
ctcggaatgggttacgacaagccagatctcggcttcgtggtgcatgtcgggtcaccgccg
tcgccggtctcctactatcagcaggtcggccgtgccggacgcgccctcgacgacgccgtc
gtgatgctgctggcgtcgcagaccgacgaccggatctgggaccatttcgcgaccgcgacc
atccccgatcccgacaagatgcgtgacctgctcgccgccctggaatccgcggcggagccg
cagtcggtggtgcagctcgaggccgccacccgcttccggcgcacgcgtatcgagttgatg
ctgaagcaactggcggtcgacggcgtcaccgaccggaccgccgacgggtgggtcgtcacc
ggcaagccctggacctacgacgccgagcactacgacggcatcctcgccgtgcgccgtcgg
gaggccgacatcatgcgcgcctacatcgcgggccgcacgtgcctcatgcggttgctgacc
gaatccctcgacgacccgcaggccgcggactgcggacgctgctcggtctgccggggcgcc
ctcagcgaaggactccccgattcggtcgacgccgagatcgtccgcaccgtgacctcgacg
ctgcgtcgcaaggcccagaccctggacccccgcaagatgtggccgggcggcgaattcggg
cgtcgcggaagaatttccgccgatctcctggccgagccgggtcgtgtcctggcccatgcc
gacgccccggagtgggtcgaggtgctggccgcggcccgcaacggcgacgagcgcgcgctc
gccgagttgggcgacgccgcggttgcgacgctggccgcgtgggtgcgcgacaccggtatc
cgggctgacgtcatcgtgtcgctccgtctgaccggcaccgtcctggccgagaccctggcc
gaccacctgcggaaggtcgggaaacgcgagggcggcagttttcccgtgcgcatgggcgat
ccgcccaccgacgcgaccggcgcggtcgaggccgcgtactggcgcgaccacctcggcgac
ccgcccgacgtcgcgggccgcgccgtgctgctcgtggtcgacgccaacggctcgggctgg
ccgatcaccctggccgccgccgccctccgcgaggccggcgccaccgcggtgctaccgctg
ctgatccaccggacggtgtga
DBGET
integrated database retrieval system
