Gordonia sp. JH63: GR168_08945
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Entry
GR168_08945 CDS
T10304
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
goj Gordonia sp. JH63
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goj03400
]
GR168_08945
DNA repair and recombination proteins [BR:
goj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GR168_08945
Archaeal homologous recombinant proteins
GR168_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_15
Asp_DH_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHD85495
LinkDB
All DBs
Position
1981529..1984519
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AA seq
996 aa
AA seq
DB search
MRLHRLRVRAFGPFADEITVDFDDLGGDGLFLLHGQTGAGKTTVLDAVAFALFGRVPGVR
DTNRRLHSDHAAAEDIPEVELEATIASRRLRITRSPEHERPKKRGDGTRKVNARATLVWV
DGSGPDLTRIPEIGDAVVRLLGMSADQFFQVVLLPQGDFARFLRAHSDEREALLERLFDT
ERFGDLEEWLRDRARESAAKLTEQTAVLDRVAGQIVAVGGVEPTAEPDFDWAQECLERAR
TAAERTRLESGAAQAAADQTQAAYESGSRLAELRRRGRAATERLARLADGEAALSAAAQA
RRQALQAAPIVPLADDADRVTRELTVTEQAVTRAHAELCALPEGESLCAGGSDEDLDARL
DAAIDRWTEESGRWEPLAERVAQRPALVGEIQTLDSAIVEADRRTAQTRTLLDAAPGRRA
EALAALAEAGELRMQAPTLRAERDALRRVRDALTDRDEVLARLATAEKELLDARDAHAAA
RERVLDARERRLAGMAVELAGGLAEGEPCVVCGSVTHPRPATDDGGAPASEVAVDEDAAA
AAEERASAIKAIAQSAVAALAERRTHLDAVIGGARADAVDADLARVGTELAAAERAASRL
PALQTAVDRIDAEVDGWRTTLADDESAQSARRERATALRQNLNELDEAVREATGGRGGVA
ERRRELAELVRRTRRHRNARQEAARARDRVAEATDRLSAACADAGFDDVAAVRAAFAPDK
QIAAWDTLLQEAASLRAAAEETLADEDVRAAMSAPEPDVEQLTADRDAARRRLDTAAKEH
AVAGRQAADLQEYVTHFWEAIDALAPLQARHAELQGLAELVSGRGQNARRLSLRSYVLAA
RLDEVLVAASGRLREMSSGRYEFVHTDAAGVRGRRGGLGIEVRDEYTGALRPTTTLSGGE
TFFASLALALGLADVVSAESGGRVLDTIFIDEGFGTLDPEALDLVMGVLDDLRAGGRVVG
VVSHVDELRARIPAQLHVLRGEHGSSVRVQSPLGVS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccgtctgcgcgtccgggccttcggtccgttcgccgacgagatcacggtc
gacttcgacgacctcggcggtgacggactgttcctgctgcatggccagaccggtgccggc
aagaccacggtcctcgacgcggttgccttcgcgctgttcggccgggtaccgggcgtgcgc
gacaccaaccggcgcctgcactcggatcacgctgcggccgaggacatcccggaggtcgaa
ctcgaggcgaccatcgcgtcccgccgactccggatcacgcggtcgcccgagcacgaacga
cccaagaagcgcggcgacggcacccgcaaggtgaatgcccgggcgactctcgtgtgggtc
gacggatccggacccgacctgacccgcatccccgagatcggcgacgccgtggtccggctg
ctcgggatgagtgccgatcagttcttccaggtggtcctgctgccgcagggcgacttcgcc
cggttcctgcgcgcccactccgatgagcgggaagcgctgctggagcggctgttcgacacc
gagcggttcggcgacctcgaggagtggttgcgtgaccgggcgcgggagagcgcggcgaag
ctgaccgaacagaccgccgtgctcgaccgggtcgccggtcagatcgtggcagtgggcggg
gtcgaaccgaccgccgaacccgacttcgactgggcgcaggagtgtctcgagcgtgcgcgc
accgccgcggagcgcacgcgcctcgagtcaggtgcggcgcaggccgcggccgaccagacg
caggccgcttacgagagcgggagccggctcgccgagctgcgtcgccgggggcgtgcggcc
accgagcgactcgcccggctcgcggacggcgaagccgctctgagcgcggcggcacaggct
cgtcggcaggccctgcaggcggcgcccatcgtgccgctcgccgacgacgccgaccgtgtc
acccgcgaactcacggtcaccgagcaggccgtcacgcgtgcgcacgcagagctgtgcgcg
ctgccggagggtgagtcgctgtgcgccggcgggtcagacgaggatctcgacgcacgcctg
gatgctgcgatcgatcgctggaccgaggagtcggggcggtgggagcccctcgccgaacgc
gtcgcgcagcggccggctctggtcggcgagatccagaccctggactcggcgatcgtcgag
gcggaccgccgcactgcccagacccggaccctgctcgacgccgcgccgggccgtcgcgcc
gaggcccttgccgcgctggcggaagcgggggagttgcggatgcaggccccgacactgcgg
gccgagcgcgacgcactccgccgtgtacgcgacgcactcaccgaccgggacgaggtgctg
gcccggctcgcgaccgcggagaaggagttgctcgacgcccgcgacgcccatgccgctgcg
cgggagcgcgtgctcgacgcccgcgagcgtcgcctcgccgggatggcagtggaactggcg
ggcggactcgccgagggtgaaccctgcgtcgtgtgtggttctgtcacacaccctcgaccg
gccaccgacgacggcggcgccccggcgtccgaggtcgcggtcgacgaagacgcggcagcg
gccgccgaggagcgggcgagcgcgatcaaggccatcgcgcaatccgcggtggcggctctc
gcggaacgccgtacgcatctcgatgccgtcatcggtggtgctcgggccgacgccgtcgac
gccgacctcgcccgggtgggcaccgaactggctgccgcggaacgtgccgcgtcgcgactc
ccagcgctgcagacagcggtcgatcggatcgacgccgaggtcgatgggtggcgcaccacc
ctcgccgacgacgagtcggcccagtccgcccgtcgcgagcgggcgaccgcgttgcggcag
aacctcaacgagctcgatgaggccgtccgggaggcaaccggcggccgcggcggggtcgcc
gagcggcgccgtgaactcgccgagctggtccgtcgcacacgtcgtcaccggaacgcccgg
caagaagctgcgcgagcgcgggaccgggtcgccgaggcgaccgatcgattgtccgcggcg
tgtgccgacgccgggttcgacgatgtcgccgccgtccgagcggcgttcgccccggacaag
cagatcgcggcgtgggacacgttgctgcaggaggccgcgagtctgcgcgccgctgccgag
gagactctcgccgacgaggatgtgcgcgccgcgatgtcggctccggagccggatgtcgaa
cagctcaccgcagaccgtgatgccgcccgccgccgcctggacaccgccgcgaaggaacac
gccgtggccggccggcaggcggccgacctccaggagtacgtcacccacttctgggaggcc
atcgacgccctggcgcctctgcaggcacgccacgccgaactccagggactcgccgaattg
gtcagcgggcgcggacagaacgcgcgccggttgtcgctgcggtcctacgtgctggccgca
cgtctcgacgaggtcctcgtcgccgcgtcgggtcgtctccgcgagatgtcctcggggcgt
tacgagttcgtccacaccgacgccgcgggtgtccggggccggcgtggcggcctcggtatc
gaggtccgcgacgagtacaccggcgcgctccgcccgacgacgacgctgtccggcggcgag
accttcttcgcatcgctggccctcgcactcggactcgccgatgtcgtctccgcggagtcg
ggcggccgcgtgctcgacaccatcttcatcgacgagggattcggcaccctcgatcccgag
gcgctcgacctcgtcatgggggtcctggatgacttgcgggccggcgggcgtgtcgtcggc
gtggtgagtcacgtcgacgaactccgcgcacgaattccggcccagctgcacgtcctccgc
ggcgagcacgggtcgtcggtccgagtgcagagcccgctcggcgtgtcctga
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