Gordonia sp. JH63: GR168_08975
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Entry
GR168_08975 CDS
T10304
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
goj Gordonia sp. JH63
Pathway
goj00300
Lysine biosynthesis
goj00470
D-Amino acid metabolism
goj01100
Metabolic pathways
goj01110
Biosynthesis of secondary metabolites
goj01120
Microbial metabolism in diverse environments
goj01230
Biosynthesis of amino acids
Module
goj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GR168_08975 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GR168_08975 (lysA)
Enzymes [BR:
goj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GR168_08975 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QHD85500
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All DBs
Position
1989058..1990479
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AA seq
473 aa
AA seq
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MNAHPAGPRHAELLAAPHLAERPNDPAVLAEIPAQVWPRNASRDESGELRLAGVPVSQLA
EEFGTPAFVVDEADFRSRCRDMMAAFGPYGRVHYASKAFLSTEIARWVDDEGLSLDVCSG
GELAIALRAGFPPERIALHGNNKSVDELRAAVDAGIGHVVLDSMIEIDRLDAIAGERGVV
ADVLVRVTVGVEAHTHEFISTAHEDQKFGFSLAGGIAMGAIRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLRDVVGEFGVEKTAQMSVVDLGGGLGISYLPEERPLPVQKV
AETLAAIVERESAALGLPMPTIAVEPGRAIAGPGTITLYRVGTVKDVALGGGAVRRYVSV
DGGMSDNIRTVLYDAEYDVRLVSRVSEARAVVCRVVGKHCESGDIVIKDCWLPEDLGPGD
LIAVAATGAYCYSMSSRYNMTMRPPVVAVADGNARLLLRRETIDDFLSLEVGL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccaccccgccggcccccggcacgccgaactgctggccgcgccccatctcgcc
gagcgtccgaacgacccggccgtgctcgccgagatccccgcacaggtgtggccgcgcaac
gcatcccgcgacgaatcgggcgagctgcggttggccggcgtgccggtgagtcagctcgcc
gaagagttcgggacgccggcgttcgtcgtggacgaggccgacttccggtcgcgctgccgg
gacatgatggcggcgttcggcccgtacgggcgagtgcactacgcgtcgaaggcgttcctg
agcaccgagatcgcgcgctgggtcgacgacgaggggctgtccctggacgtctgcagcggt
ggtgaactcgccatcgcactgcgcgccggtttcccgccggagcgaatcgcactgcacggc
aacaacaagagcgtcgacgagctgcgcgctgcggtcgacgccggaatcgggcacgtcgtc
ctcgactcgatgatcgagatcgatcggctcgacgcgatcgccggcgaacgcggtgtcgtc
gccgacgtgctggtgcgcgtgaccgtcggtgtcgaggcgcacacccacgagttcatctcg
accgcacacgaggaccagaagttcggattctccctcgccggtgggatcgcgatgggagcc
atccggcgggtcttcgcgaccgacaacctcaggctcgtgggtctgcacagccacatcggg
tcgcagatcttcgacatggacggattcgagctggccgcccaccgggtgctcggactgctc
cgcgacgtcgtcggcgagttcggtgtcgagaagaccgcgcagatgtcggtcgtcgatctc
ggtggcggactggggatctcgtacctccctgaggaacgcccgctgccggtgcagaaggtg
gcggagacgctcgcggcgatcgtcgagcgggagtcggcagcactcgggctgcccatgccg
accatcgccgtcgaaccgggccgcgccatcgccggtcccggcacgatcacgctgtatcgc
gtcggcaccgtgaaggacgtcgcactgggcggcggcgccgtacgacgctacgtctccgtc
gacggcggcatgagcgacaacatccgcaccgttctctacgacgccgaatacgacgtgcgg
ctcgtgtcccgggtgtcggaggcccgtgcggtggtgtgccgggtggtgggaaagcattgc
gagagcggcgacatcgtgatcaaggactgttggctgccggaggatctcggccccggcgac
ctgatcgcggtggcggccaccggtgcctactgctactcgatgtcgagccgctacaacatg
accatgagaccgcccgtggtggcggtggccgacgggaacgcccggctgctgctgcgccgg
gagaccatcgacgacttcctcagcctggaggtgggcctgtga
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