KEGG   Gordonia sp. JH63: GR168_08975
Entry
GR168_08975       CDS       T10304                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
goj  Gordonia sp. JH63
Pathway
goj00300  Lysine biosynthesis
goj00470  D-Amino acid metabolism
goj01100  Metabolic pathways
goj01110  Biosynthesis of secondary metabolites
goj01120  Microbial metabolism in diverse environments
goj01230  Biosynthesis of amino acids
Module
goj_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:goj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GR168_08975 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GR168_08975 (lysA)
Enzymes [BR:goj01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     GR168_08975 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QHD85500
LinkDB
Position
1989058..1990479
AA seq 473 aa
MNAHPAGPRHAELLAAPHLAERPNDPAVLAEIPAQVWPRNASRDESGELRLAGVPVSQLA
EEFGTPAFVVDEADFRSRCRDMMAAFGPYGRVHYASKAFLSTEIARWVDDEGLSLDVCSG
GELAIALRAGFPPERIALHGNNKSVDELRAAVDAGIGHVVLDSMIEIDRLDAIAGERGVV
ADVLVRVTVGVEAHTHEFISTAHEDQKFGFSLAGGIAMGAIRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLRDVVGEFGVEKTAQMSVVDLGGGLGISYLPEERPLPVQKV
AETLAAIVERESAALGLPMPTIAVEPGRAIAGPGTITLYRVGTVKDVALGGGAVRRYVSV
DGGMSDNIRTVLYDAEYDVRLVSRVSEARAVVCRVVGKHCESGDIVIKDCWLPEDLGPGD
LIAVAATGAYCYSMSSRYNMTMRPPVVAVADGNARLLLRRETIDDFLSLEVGL
NT seq 1422 nt   +upstreamnt  +downstreamnt
gtgaacgcccaccccgccggcccccggcacgccgaactgctggccgcgccccatctcgcc
gagcgtccgaacgacccggccgtgctcgccgagatccccgcacaggtgtggccgcgcaac
gcatcccgcgacgaatcgggcgagctgcggttggccggcgtgccggtgagtcagctcgcc
gaagagttcgggacgccggcgttcgtcgtggacgaggccgacttccggtcgcgctgccgg
gacatgatggcggcgttcggcccgtacgggcgagtgcactacgcgtcgaaggcgttcctg
agcaccgagatcgcgcgctgggtcgacgacgaggggctgtccctggacgtctgcagcggt
ggtgaactcgccatcgcactgcgcgccggtttcccgccggagcgaatcgcactgcacggc
aacaacaagagcgtcgacgagctgcgcgctgcggtcgacgccggaatcgggcacgtcgtc
ctcgactcgatgatcgagatcgatcggctcgacgcgatcgccggcgaacgcggtgtcgtc
gccgacgtgctggtgcgcgtgaccgtcggtgtcgaggcgcacacccacgagttcatctcg
accgcacacgaggaccagaagttcggattctccctcgccggtgggatcgcgatgggagcc
atccggcgggtcttcgcgaccgacaacctcaggctcgtgggtctgcacagccacatcggg
tcgcagatcttcgacatggacggattcgagctggccgcccaccgggtgctcggactgctc
cgcgacgtcgtcggcgagttcggtgtcgagaagaccgcgcagatgtcggtcgtcgatctc
ggtggcggactggggatctcgtacctccctgaggaacgcccgctgccggtgcagaaggtg
gcggagacgctcgcggcgatcgtcgagcgggagtcggcagcactcgggctgcccatgccg
accatcgccgtcgaaccgggccgcgccatcgccggtcccggcacgatcacgctgtatcgc
gtcggcaccgtgaaggacgtcgcactgggcggcggcgccgtacgacgctacgtctccgtc
gacggcggcatgagcgacaacatccgcaccgttctctacgacgccgaatacgacgtgcgg
ctcgtgtcccgggtgtcggaggcccgtgcggtggtgtgccgggtggtgggaaagcattgc
gagagcggcgacatcgtgatcaaggactgttggctgccggaggatctcggccccggcgac
ctgatcgcggtggcggccaccggtgcctactgctactcgatgtcgagccgctacaacatg
accatgagaccgcccgtggtggcggtggccgacgggaacgcccggctgctgctgcgccgg
gagaccatcgacgacttcctcagcctggaggtgggcctgtga

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