Gordonia sp. JH63: GR168_09030
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Entry
GR168_09030 CDS
T10304
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
goj Gordonia sp. JH63
Pathway
goj00260
Glycine, serine and threonine metabolism
goj00460
Cyanoamino acid metabolism
goj00630
Glyoxylate and dicarboxylate metabolism
goj00670
One carbon pool by folate
goj00680
Methane metabolism
goj01100
Metabolic pathways
goj01110
Biosynthesis of secondary metabolites
goj01120
Microbial metabolism in diverse environments
goj01200
Carbon metabolism
goj01230
Biosynthesis of amino acids
goj01240
Biosynthesis of cofactors
goj04981
Folate transport and metabolism
Module
goj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GR168_09030
09102 Energy metabolism
00680 Methane metabolism
GR168_09030
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GR168_09030
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GR168_09030
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GR168_09030
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GR168_09030
Enzymes [BR:
goj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GR168_09030
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QHD85511
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Position
2002093..2003352
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AA seq
419 aa
AA seq
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MSPDAPRSGPPGVEAGGAPTGDAAVDALVSREVGRRRDTVQLLASETDPTPGVRAAMASV
FDAKYAEGYPGARYHGGCDVADELEELAVGRARALFGAEYVNVQPLSGSAANLAVYAAFA
QPGDPVLALRLEHGGHQTHGSRANFSGRWFSPLHYEVRRDDELVDYDQVRDLALVHRPRI
LVAGAASYSRTFDFPTLRRIADEAECILWVDAAHLAGHIAAGLLPSPVPHADIVTLSTNK
VIRGPRGGVILARAEHGEALRKAVFPFVQGGPAMHAVAAKAVACAESGTDEFAGYVRRAV
DNARGLATELASRGARVVSGGTDIHLAVVDVSGFGISGMEAQHRLGAAGIVVDKAVLPFD
TRPVSEGSAIRIGTPVATERGMTAAMHPIVADAMAAAMSTRDRETHQRIRREIAALAYG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgacgcgccgaggtccggaccacccggcgtcgaggcgggcggcgcaccgacc
ggcgacgccgcggtcgacgccctggtgagccgcgaggtcggacggcgccgcgacaccgtg
cagctgctcgccagcgagaccgatccgacgcccggggtgcgggccgcgatggcgtcggtc
ttcgacgcgaagtatgccgaagggtatcccggggcgcgctaccacggtggttgtgacgtg
gccgacgagctcgaggagctcgccgtcggccgggcccgtgcgctgttcggcgccgagtac
gtcaatgtccagccgctgtcgggcagtgcggccaacctcgccgtctatgccgccttcgcc
cagcccggagacccggtgctcgcgctgcgcctcgaacacggcggccaccagacgcacggt
tctcgggcgaacttctccgggcggtggttctcgccgttgcactacgaggtccgccgcgac
gacgaactcgtcgactacgaccaggtcagggatctcgcgctggtgcaccgcccccgcatc
ctcgtcgccggcgccgcgtcctactcgcggacgttcgacttcccgaccctgcgccggatc
gccgacgaggccgagtgcatcctctgggtcgacgccgcacatctcgccgggcacatcgcg
gccggcctgctgccctcgccggtgccgcacgccgacatcgtcaccctgtccaccaacaag
gtgatccgcggtccgcgcggcggggtcatcctcgcgcgggccgaacacggcgaggccctg
cgcaaggcggtcttcccgttcgtgcagggcggtcccgcgatgcacgccgtcgccgcgaag
gcggtcgcctgcgcggaatccggtaccgacgagttcgccggctacgtccgtcgtgcggtg
gacaacgcccgcggtctcgccacggaactggcctctcggggcgcccgggtggtgtccggc
ggcaccgacatccacctcgcggtcgtcgacgtcagcggcttcggcatctccgggatggag
gcgcagcaccggctcggcgcggccgggatcgtcgtcgacaaggcggtcctcccgttcgac
acccgccccgtctccgagggatcggcgatccggatcggtacgccggtggccaccgagcgc
ggcatgaccgccgcgatgcatccgatcgtcgccgacgcgatggccgccgcgatgtcgacg
cgcgaccgtgagacacaccagcggatccgtcgcgagatcgccgcactggcctacgggtag
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