Gordonia sp. JH63: GR168_09820
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Entry
GR168_09820 CDS
T10304
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
goj Gordonia sp. JH63
Pathway
goj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GR168_09820 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goj03400
]
GR168_09820 (mutM)
Enzymes [BR:
goj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GR168_09820 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GR168_09820 (mutM)
DNA repair and recombination proteins [BR:
goj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GR168_09820 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Tautomerase
NFACT_N
TackOD1
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QHD85646
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All DBs
Position
2178506..2179417
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AA seq
303 aa
AA seq
DB search
MPELPEVETVRIGLETHLVGRVVASTEVLHPRAVRRHAGGEPDLIGRLAGKRVTGVRRRG
KYLWIDVADSADRAALVVHLGMSGQMLIARTGTPDHTHLRIRAVLDDENELRFVDQRTFG
GWHLDDYTPDVYAPPGNTETTDPSPADIPVSVAHIATDPFDPAFDPVRVVDRMRAKHSEI
KRVLLDQTVISGVGNIYADEALWRARLHGSRIAETISRKKLRELIDAVTDVMADALKVGG
TSFDALYVNVNGQSGYFERSLNAYGRAGEPCRRCGAIMRREQFMNRGSFSCPRCQRPPKA
NPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaggtcgagaccgtccgcatcggtctcgagacccatctcgtcggt
cgggtggtggcctcgaccgaggtccttcatccgcgcgcggtccgtcgtcacgccggcggt
gagccggatctgatcggtcggctcgccggcaagcgggtgaccggcgtccggcgccgcggc
aagtacctgtggatcgatgtcgccgactccgccgaccgtgcggcgctcgtcgtccacctc
gggatgagtggccagatgctgatcgcccggaccggaacccccgaccacacgcacctgcgt
atccgcgcggtcctcgacgacgagaacgaactccgcttcgtcgatcagcggaccttcggc
ggctggcatctcgacgactacacacccgatgtgtacgcgcccccggggaatacggagacg
accgacccgtcgcccgccgacatcccggtctcggtggcacacatcgcgaccgatccgttc
gacccggccttcgatcccgtccgcgtggtggatcgcatgcgcgccaaacactccgagatc
aaacgggtcctgctggatcagacggtgatctccggcgtcggcaacatctacgccgacgag
gcgctgtggcgcgcacgtctgcacggctcgcggatcgccgagacgatcagtcgcaagaaa
ctgcgcgaactcatcgatgccgtcaccgacgtgatggcggatgcgctgaaggtcggcggt
acctcgttcgacgcgctctacgtgaacgtcaacggacagtccggctacttcgagcggtcc
ctgaacgcctacgggcgggcgggggagccgtgtcgccgatgcggcgcgatcatgcgccgc
gagcagttcatgaaccgtggctcgttctcgtgtccgcggtgccaacggccgccgaaggcg
aacccgggctga
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