Gordonia sp. JH63: GR168_10220
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Entry
GR168_10220 CDS
T10304
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
goj Gordonia sp. JH63
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goj03016
]
GR168_10220 (truB)
Enzymes [BR:
goj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GR168_10220 (truB)
Transfer RNA biogenesis [BR:
goj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GR168_10220 (truB)
Prokaryotic type
GR168_10220 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QHD85710
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Position
2260756..2261655
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AA seq
299 aa
AA seq
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MADATIENAGLLVVDKPAGMTSHDVVSRCRKIFNTRRVGHAGTLDPMATGVLVVGIERAT
KLLGLLSLTTKSYTATIRLGASTTTDDREGEILDTADASGVLDADIAAAMADLTGDIQQV
PAKVSAIKVDGRRAHALVRTGADFDLAARPVTVSRFELLDARRDAAFVDLDVAVDCSSGT
YIRSLARDLGAALGVGGHLTELRRTAVGPFTLDHARTLDDVRDVPRVSLDIDEAVKISFP
RRDIDEDEAESISQGRWLEPIGRKEIYVVVDPREQAIALIQEKGRRASSVMVVRPATLR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacgcaaccatcgagaacgccggactgctcgtcgtcgacaagccggccgggatg
accagccacgatgtcgtgtcacgatgccggaagatcttcaacacccgccgcgtggggcac
gccggtaccctcgacccgatggccaccggtgtcctggtcgtcgggatcgagcgggccaca
aagcttctcggactcctctcgctgacgacgaagtcgtacacggcgacgatccgactcggc
gcgtccaccacgaccgacgaccgcgaaggcgagatcctcgacacggcagacgcatccggg
gtcctcgacgccgacatcgccgcggccatggccgatctcaccggtgacatccagcaggtc
ccggcgaaggtcagcgccatcaaggtcgacgggcggcgagcgcacgcactggtgcggacc
ggagccgacttcgacctcgcggcgcgcccggtcaccgtgtcccgcttcgagctgctcgac
gcccggcgcgacgcggcgttcgtcgatctcgacgtggccgttgactgttcgtcgggcacg
tacatccggtcactggcgcgcgatctcggcgccgcgctcggggtcggggggcacctgacc
gaactccggcggacggcggtcggcccgttcaccctcgaccatgcgcggacactcgacgac
gtccgcgacgtgccgcgcgtcagcctcgacatcgacgaggcggtcaagatctcgttcccg
cgccgcgacatcgacgaggacgaggccgagtcgatcagtcagggtcgatggctggagccg
atcggccgcaaggagatctatgtcgtcgtcgatccgcgggaacaggcgatcgcgctgatc
caggagaagggtcgccgggcgagctcggtgatggtggtgcggccggcgactctgcgctga
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