Gordonia sp. JH63: GR168_10565
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Entry
GR168_10565 CDS
T10304
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
goj Gordonia sp. JH63
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goj03021
]
GR168_10565
Transcription machinery [BR:
goj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GR168_10565
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QHD85772
LinkDB
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Position
complement(2336885..2337901)
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AA seq
338 aa
AA seq
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MSRSTVARSTPTKGFAEVTPPGTRPAMTEQDLDAQSPAADLVRVYLNGIGRTALLNAEQE
VELAKQIEAGLYAKHVLATKKRLSAAKKRDLAVIVREGEAARAHLLEANLRLVVSLAKRY
TGRGMPLLDLIQEGNLGLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPV
HLVEQVNKLARIKRELHQQLGREATDDELANESGIPAEKIADLLDHSRDPVSLDMPVGSD
EEAPLGDFIEDAEATSAENAVIAGLLHSDIRAVLATLDEREQQVIRMRYGLDDGQPRTLD
QIGRMFGLSRERVRQIEREVMGKLRHGDRAERLRAYAS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctcgacagttgcacgttcgaccccgaccaaaggtttcgccgaagtcacccct
ccgggtacccggccggcgatgaccgaacaggatctcgacgcccagtctccagcggcggat
ctggtccgtgtctatctgaacggaatcggtcgcaccgcccttctcaacgcggagcaggag
gtcgaactcgccaagcagatcgaggccgggctctacgccaaacacgttctggccaccaag
aagcggctgtccgcggccaagaagcgtgacctcgcggtcatcgtccgtgaaggcgaggcc
gcccgggcccacctgctcgaggcgaacctccgcctggtcgtgtcgctggccaagcgctac
accggccgcggcatgcctctcctcgacctgatccaggagggcaacctcggtctgatccgg
gcgatggagaagttcgactacgccaagggcttcaagttctcgacctacgccacctggtgg
attcgtcaggcgatcacccgcggaatggcggaccagagccgcacgatccggctccccgtc
catctcgtggagcaggtcaacaaactggcccgcatcaagcgcgagctgcaccagcagctc
ggccgcgaagcgaccgacgacgagctggccaacgaatcgggcatccccgcggagaagatc
gccgacctgctcgaccacagccgcgatccggtgagcctcgacatgccggtgggcagcgac
gaggaagctcccctgggcgatttcatcgaggacgccgaggccacctccgccgagaacgcc
gtcatcgccggcctgttgcactccgacatccgcgccgtcctggcgacgctggacgagcgt
gagcagcaggtcatccggatgcgctacggcctcgacgacggccagccgcgcaccctggat
cagatcggccgcatgttcgggctgtcgcgcgagcgcgtgcgccagatcgagcgcgaggtc
atgggcaagctccgccacggcgaccgtgccgagcgcctgcgcgcctacgccagctga
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