Gordonia sp. JH63: GR168_11075
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Entry
GR168_11075 CDS
T10304
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
goj Gordonia sp. JH63
Pathway
goj00220
Arginine biosynthesis
goj00240
Pyrimidine metabolism
goj00250
Alanine, aspartate and glutamate metabolism
goj01100
Metabolic pathways
goj01110
Biosynthesis of secondary metabolites
goj01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GR168_11075 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GR168_11075 (carB)
00220 Arginine biosynthesis
GR168_11075 (carB)
Enzymes [BR:
goj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GR168_11075 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_5
RimK
ATP-grasp_2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QHD85865
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Position
2449822..2453157
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AA seq
1111 aa
AA seq
DB search
MPRREDINHVLVIGSGPIVIGQACEFDYSGTQACRVLKAEGLRVSLVNSNPATIMTDPEF
ADATYIEPITAEYVEKVIEAERDAGHPIDAVLATLGGQTALNTAVALHDRGSLEKYGIEL
IGADFDAIQRGEDRQMFKDIVEKVGGESARSRVCHTMDEVRDTVAELGFPVVVRPSFTMG
GLGSGMAYDDEDLDRIAGGGLAASPTANVLIEESILGWKEYELELMRDNRDNVVVVCSIE
NLDPVGVHTGDSVTVAPAMTLTDREYQIMRDLSIDILREVGVDTGGCNIQFAQDPRDGRL
VVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYSLDEIVNDITKETPACFEPTLDYVV
VKAPRFAFEKFPGADDTLTTTMKSVGEAMSLGRSFAEALGKVMRSLETKAGGFWAEPNRP
DPATVDLPALLEDIKTPRDGRLYKLMLAFEAGATIEDLYEATAIDPWFLAEIGGIAALGA
EIRDADTLDEPLLREAKSTGFSDRQIAALRSDFADEAAVRAHRIGLGVRPVYKTVDTCAA
EFEAKTPYHYSSYELDPGATSEIAPQTERPKVLILGSGPNRIGQGIEFDYSCVHAALTLS
DAGYETVMVNCNPETVSTDYDTADRLYFEPLTFEDVLEVYHAESESGTVEGVIVQLGGQT
PLGLAHRLEEAGVPIVGTSPAAIDLAEDRGEFGKVLTAAGLPAPAFGTATSFDEARDTAA
RIGYPVLVRPSYVLGGRGMEIVYDEKSLEDYISRATELTPDHPVLVDRFLEDAVEIDVDA
LCDGDEVYIGGVMEHIEEAGIHSGDSACALPPVTLGRADLEMVRTSTEALARGIGVKGLL
NVQYALKDDILYVLEANPRASRTVPFVSKATAVPLAKACARVMLGASIADLREQGILPAT
GDGGEAPATAPISVKEAVLPFNRFRRHDGSGVDNLLSPEMKSTGEVMGIDADFGRAFAKS
QTAAYGSLPTSGKIFVSVANKDKRALIFPVKHLADLGFDILATEGTADVLRRNGIKCETV
RKHFEAAEGQRTIVDIIRAGEVTMVINTPYGNSGPRVDGYEIRSAAVSVNIPCITTVQGA
SAAVQGIEAALTGDIGVRSLQNRHADLAGRS
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgcgaagacatcaaccacgtcctggtcatcgggtccgggccgatcgtgatc
ggtcaggcctgcgagttcgactactccggcacgcaggcctgccgggtcctcaaggccgag
ggcctgcgggtcagcctggtcaactcgaacccggccacgatcatgaccgatccggagttc
gccgacgccacctacatcgagccgatcacggccgagtacgtggagaaggtcatcgaggcc
gagcgcgacgccgggcatcccatcgacgccgtgctggcgaccctcggcggtcagaccgcg
ctcaacaccgctgtcgcactgcacgatcgcggctcgctggagaagtacggcatcgagctg
atcggcgccgacttcgacgccatccagcgcggcgaggaccggcagatgttcaaggacatc
gtcgagaaggtcggcggggagagcgcgcggtcccgcgtctgccacacgatggacgaggtg
cgggacaccgtcgccgagctcgggttcccggtcgtcgtccggccgtcgttcaccatgggc
ggtctcggctcgggcatggcctacgacgacgaggacctcgaccggatcgcgggcggcggt
ctcgccgcctccccgacggcgaacgtcctcatcgaggagtcgatcctcgggtggaaggag
tacgagctcgagctcatgcgcgacaaccgcgacaacgtggtggtcgtctgctcgatcgag
aacctcgacccggtcggcgtccacaccggtgactcggtgaccgtcgccccggcgatgacg
ctcaccgaccgcgagtaccagatcatgcgcgacctctccatcgacatcctgcgcgaggtc
ggcgtcgacaccggcggttgcaacatccagttcgcccaggacccccgcgacggccgcctc
gtcgtcatcgagatgaacccgcgcgtgtcgcggtcgtcggcgctcgcgtcgaaggccacc
ggcttcccgatcgccaagatcgccgcgaagctcgccatcgggtacagcctcgacgagatc
gtcaacgacatcaccaaggagacgccggcctgtttcgagccgacgctcgactacgtcgtg
gtgaaggctccgcggttcgcgttcgagaagttcccgggcgccgatgacacgctgaccacc
acgatgaagtcggtgggcgaggccatgagcctcggccgcagcttcgccgaggcgctcggc
aaggtcatgcggtcgctggagacgaaggccggcggcttctgggccgagcccaaccgccct
gacccggcgaccgtcgacctgcccgcactgctcgaggacatcaagaccccgcgcgacggc
cggttgtacaagctgatgctcgccttcgaggccggcgcgacgatcgaggacctctacgag
gccactgcgatcgatccctggttcctcgccgagatcggcgggatcgccgcgctcggagcg
gagatccgcgacgccgacacactggacgagccgttgctgcgcgaggccaagtccaccggc
ttctccgaccgtcagatcgccgctctgcgttcggatttcgccgacgaggcagccgttcgc
gcccaccggatcgggctgggcgtacggccggtctacaagaccgtcgacacctgcgcggcc
gagttcgaggcgaagacgccgtaccactactcgagctacgaactcgaccccggggcgacc
agtgagatcgcgccccagacggagcgccccaaggtcctgatcctcggttcgggccccaac
cgcatcggtcagggcatcgagttcgactactcgtgcgtgcacgccgcattgaccctgtcg
gacgccggatacgagaccgtcatggtcaactgcaacccggagacggtgtccaccgactac
gacaccgccgaccgtctctacttcgagccgctgacgttcgaggacgtcctcgaggtctac
cacgccgaatcggagtcgggcaccgtcgaaggtgtcatcgtccagctcggcggccagacg
ccgctcggtctcgcgcaccgtttggaggaggccggggtgccgatcgtcggcaccagcccg
gcggccatcgacctcgccgaggatcgcggcgagttcggcaaggtgctgaccgccgccgga
ctaccggccccggcgttcggtaccgcgacgagcttcgacgaggcccgcgacaccgccgcc
cggatcgggtacccggtgctcgtccggccgtcgtacgtcctcggtggacgcggcatggag
atcgtctacgacgagaagtccctggaggactacatctctcgcgcgaccgagctgaccccg
gaccacccggtactggtcgaccggttcctcgaagacgcggtggagatcgacgtcgacgcc
ctctgcgacggcgacgaggtctacatcggcggcgtgatggaacacatcgaagaggccgga
atccactccggagactcggcgtgcgcgttgccgccggtcactctcggccgcgccgacctc
gagatggtgcggacctcgaccgaggcgctggccaggggcatcggcgtcaagggtctgctc
aacgtccagtacgcgctcaaggacgacatcctctacgtgctcgaggccaacccgcgtgcg
agccggacggtcccgttcgtctccaaggccaccgcggtgcccctggccaaggcgtgtgcg
cgcgtcatgctcggcgcgtcgatcgccgatctgcgggagcagggcatcctgcccgccacc
ggcgacggcggagaggctccggcgacggcgccgatctcggtgaaggaagcggtcctgccg
ttcaatcggttccgtcgccatgacggcagcggggtcgacaacctgctgagccccgagatg
aagtcgaccggcgaggtcatgggcatcgacgccgacttcggtcgcgcattcgccaagtcg
cagaccgccgcctacggctcgctcccgaccagcggcaagatcttcgtgtcggtggccaac
aaggacaagcgggcgctgatcttcccggtgaagcacctcgccgacctggggttcgacatc
ctggccaccgaggggaccgcggacgtgttgcgccgcaacgggatcaagtgcgagacggtg
cgcaagcacttcgaggccgccgagggtcagcgcacgatcgtcgacatcatccgcgccggc
gaggtgacgatggtgatcaacaccccgtatggcaactcggggccccgcgtcgacggctac
gagatccggagcgccgcggtgtcggtgaacatcccgtgtatcaccacggtgcagggtgcc
tcggccgccgtgcagggcatcgaggccgcgttgaccggcgacatcggggtgcggtcgctg
cagaaccggcacgccgacctggccggccgctcgtga
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