Gordonia sp. JH63: GR168_11705
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Entry
GR168_11705 CDS
T10304
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
goj Gordonia sp. JH63
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
goj03051
]
GR168_11705 (pafA)
Enzymes [BR:
goj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
GR168_11705 (pafA)
Proteasome [BR:
goj03051
]
Prokaryotic proteasome
Bacterial regulatory particles
GR168_11705 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QHD85973
LinkDB
All DBs
Position
2592240..2593598
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDSLIQLINHDRAGELVLEDLLVDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSEMTTLLKVGSAALVLEMIEAGVAF
RDFALDNPIRAIREVSHDPTGRRPVRLAGGRQASALDIQREYHARAVEHLTNRRPDPEMD
MVVDLWGRMLDAVESDDFAKVDTEVDWVIKRKLFQRYQDRYSMELSDPKIAQLDLAFHDI
KRGRGVFDVLMRKGLVARATTDEAIKTAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggcatcgagaccgagttcggtgtcacgtgcaccttccacggc
caccgccgcctgagtccggacgaggtcgcgcggtacctcttccgccgggtcgtgtcgtgg
ggccggtcctcgaacgtcttcctgcagaacggcgctcgcctctatctcgacgtcggatcg
catcccgaatacgccaccgcggagtgcgacagcctcatccagctgatcaaccacgaccgc
gcgggcgaactggttctcgaggacctgctcgtcgatgccgaacaacgcctggccgacgag
ggcatcggcggcgacatctatctgttcaagaacaacaccgactcggccggcaactcctat
ggatgccacgagaattatctcgtcgtgcgggcgggcgagttctcccgcatctccgacgtc
ctgttgccgttcctcgtgacgcgccagctgatctgtggtgcgggcaaggttctgcagacc
cccaaggccgcgaccttctgcctgtcccagcgcgccgagcacatctgggagggcgtctcc
tcggcgaccacccggtcgcgcccgatcatcaacacacgcgacgagccgcatgccgacgcc
gagaagtaccgcaggctgcacgtcatcgtcggcgactcgaacatgtcggagatgaccacc
ctcctcaaggtcggttcggcggctctcgtcctggagatgatcgaggccggtgtcgcgttc
cgggacttcgcgctcgacaatccgatccgcgccatccgcgaggtcagccatgacccgacg
gggcgacgcccggtgcgcctcgccggcggtcggcaggccagcgccctcgacatccagcgc
gagtatcacgcacgcgccgtcgagcacctcaccaaccgccggcccgaccccgagatggac
atggtcgtggacctgtggggacggatgctcgacgccgtggagagcgacgacttcgccaag
gtcgacaccgaggtcgactgggtcatcaagcgcaagctgttccagcgctaccaggaccgg
tattcgatggagctctcggatccgaagatcgcgcagctcgacctggcgttccacgacatc
aaacgcggccgcggcgtgttcgacgtcctgatgcgcaaggggttggttgcccgggcgacc
accgacgaggccatcaagaccgcggtcaacgagccgccgcagaccacccgcgccaagctc
cggggcgacttcatctcggccgcgcagaaagccgggcgtgacttcaccgtcgactgggtt
cacctcaagctcaacgaccaggcccagcggacggtgctgtgcaaggacccgttccgcagt
gtcgacgagcgcgtcgatcgcctcatcgcctcgatgtga
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