Gordonia sp. JH63: GR168_13275
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Entry
GR168_13275 CDS
T10304
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
goj Gordonia sp. JH63
Pathway
goj00260
Glycine, serine and threonine metabolism
goj00630
Glyoxylate and dicarboxylate metabolism
goj00670
One carbon pool by folate
goj00785
Lipoic acid metabolism
goj01100
Metabolic pathways
goj01110
Biosynthesis of secondary metabolites
goj01200
Carbon metabolism
Module
goj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GR168_13275 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GR168_13275 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GR168_13275 (gcvP)
00670 One carbon pool by folate
GR168_13275 (gcvP)
Enzymes [BR:
goj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
GR168_13275 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
QHD86238
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Position
complement(2952682..2955603)
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AA seq
973 aa
AA seq
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MSTTEATPSDAPEGSGPDPTSAAPQFSAAFVDRHVGPDADETRRMLEAIGAASLDDLAHR
VIPAVIADELDSDVLGALPEPLSESAVLAQLGDLAARNTVARSMIGLGYYGTHTPGVILR
NVLENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGMEVANASMLDEATAAAEAMTL
MRRAGKSKSNRVIVDADLFPQTRAVLDTRAEPLGIEVVEASLHPDLPGCGLPDGDFFGVI
LQVPGASGRIVDATAIVDAAHERGALVAAGADLLAMTLVTPPGEQGADVCFGTTQRFGVP
MGFGGPHAGYLAVGSMHARQLPGRLVGISKDADGNLAYRLALQTREQHIRREKATSNICT
AQVLLAVMAAMYASYHGADGLRAIARRTHDAAARIADSIAAGGFSVAHANFFDTVEVHAP
GQADTILARARHDGINLRRVDADTIGIACDETTTDADIDAVLRAFDVAGVTPRALAQPIE
NRTSEYLTHPAFNRYRTETAMLRYLRALSDKDIALDRSMIPLGSCTMKLNATTEMEPITW
PGFAQLHPFAPVDDTAGIRELITTLEGWLVAVTGYDRVSLQPNAGSQGEFAGLLAIRGYH
LSRGDVDRDVCLIPSSAHGTNAASAVMAGMRVVVVGCRENGDVDLDDLRAKIAANEGRVA
AIMITYPSTHGVFEHDVRDVCGAVHDAGGQVYVDGANLNALVGVARPGHFGGDVSHLNLH
KTFCIPHGGGGPGVGPVAVREHLAPFLPGHPLADELPGSATIAAAPYGSAAILPITYAYI
AMMGADGLRRATLTAITAANYVAKRLGEHYPVLYTGEDGFVAHECILDLRAITKATGVTV
DDVAKRLADYGFHAPTMSFPVAGTLMVEPTESENLDEIDAFCDAMIAIRGEIELVGRGEW
PAEDNPLRGAPHTAESLVGEWDHPYSRELAVYPQGLPSAGGRAKVWPAVRRIDGVYGDRN
LVCSCPPIEAYSS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccactgaagcgaccccgtccgacgccccggaaggatccggcccggatcccact
tcggcggccccccagttctcggccgccttcgtcgaccgtcatgtcggtccggacgccgac
gagacgcgccggatgctcgaggcgatcggcgcggcttcactcgatgatctggcgcaccgt
gtcatacccgccgtcatcgccgacgagctcgactccgacgtcctgggtgcgctgcccgaa
ccgctgagcgagagtgcggtcctcgcacaactcggtgacctcgcagcccgtaacaccgtg
gcccggtcgatgatcgggctcggctactacggaacccacacgcccggcgtcatcctgcgc
aacgtgctggagaaccccgcctggtacaccgcgtacacgccatatcagcccgagatcagc
cagggacgtctcgaggcgctgctgaacttccagaccatggtcgccgacctcaccggcatg
gaggtggccaatgcctccatgctcgacgaggccaccgcggccgccgaggcgatgacgctg
atgcgtcgcgcgggcaagtcgaagtcgaaccgcgtgatcgtcgacgcggacctgttcccg
cagacgcgtgccgtcctcgacacgcgcgccgagcccctgggcatcgaggtcgtcgaggcc
tcgttgcaccccgatctgcccggatgcggactgccggacggcgacttcttcggcgtgatc
cttcaggtgcccggcgcatcgggtcgcatcgtcgacgccaccgcgatcgtcgacgccgcg
cacgagcgcggcgctctcgtcgcggccggtgccgatctcctggcgatgacactggtcacg
ccgcccggcgagcagggagccgacgtctgcttcggcacgacgcaacgcttcggtgtgccg
atgggcttcggcggaccgcacgcgggttacctcgccgtcgggtcgatgcacgcccgacag
cttcccgggcggctcgtcggtatctccaaggatgccgacggcaacctggcctaccggctc
gcgctgcagacccgcgaacagcacatccgccgggagaaggccacgagcaacatctgcacc
gcgcaagtgctgctggcggtgatggccgccatgtacgcctcgtaccacggggcggacggc
ctgcgagccatcgcacgacgcacccacgacgcagcggcccggatcgccgactcgatcgcc
gcgggcgggttctcggtggcgcacgcgaacttcttcgacaccgtcgaggtgcacgcaccc
ggtcaggccgacacgatcctcgcccgcgcccgccacgacgggatcaacctgcgacgcgtc
gacgccgacaccatcggcatcgcctgtgacgagacgacgaccgacgccgacatcgatgcc
gtcctgcgggccttcgacgtcgccggcgtcaccccgcgggcactcgcgcagccgatcgag
aatcgcaccagcgagtacctgacccatccggcgttcaaccggtaccgcaccgagaccgcg
atgctgcgctacctgcgggccctgtcggacaaggacatcgcgctcgaccgcagcatgatc
ccgctcgggtcgtgcacgatgaaactcaacgccaccaccgagatggaacccatcacgtgg
cccggcttcgcccagctgcaccccttcgccccggtcgacgacaccgcgggcatccgcgag
ctgatcaccacgctcgagggctggctcgtggcggtcaccggttacgaccgcgtcagcctc
cagcccaacgcgggttcacagggggagttcgcgggactgctcgcgatccgcggataccac
ctcagccgcggtgacgtcgaccgggatgtctgcctcatcccgtcgagcgcccacggcacg
aatgccgcgtcggcggtgatggccgggatgcgcgtcgtggtggtcgggtgccgcgagaac
ggcgacgtcgacctcgacgatctgcgcgccaagatcgcggcgaacgaaggccgggtcgcg
gcgatcatgatcacgtacccgtcgacgcacggcgtcttcgagcacgacgtccgcgacgtc
tgcggcgccgtgcacgacgccggcggccaggtctacgtggacggcgccaacctcaacgcg
ctcgtcggtgtcgcacggccgggtcatttcggcggtgacgtcagccatctcaacctgcac
aagacgttctgcatcccgcacggcggcggcgggcccggcgtcggacccgtcgcggtccgg
gagcatctggccccgttcctccccggacacccgctcgccgacgagctgcccgggtcggcc
acgatcgccgcggccccgtatggctcggcggcgatcctgccgatcacctatgcctacatc
gcgatgatgggcgcggacggtctccggcgggcgacgctcacggcgatcaccgccgccaac
tatgtcgccaagcggctcggtgagcactatccggtgctctacaccggcgaggacggcttc
gtcgcccacgagtgcatcctcgacctccgggccatcaccaaggccaccggcgtcaccgtc
gacgacgtggcaaaacgactcgccgactacggttttcacgcaccgaccatgagtttcccg
gtggccggcacgctgatggtcgagcccaccgagagcgagaacctcgacgagatcgacgcg
ttctgcgatgcgatgatcgccatccgcggcgagatcgaactcgtcggacgaggggagtgg
cccgccgaggacaatccgctccgcggcgccccgcacacggccgagtcgctcgtcggcgag
tgggaccacccgtactcgcgggaactcgccgtctacccgcagggactgccgtccgcgggc
ggccgggcgaaggtgtggccggccgtccggcggatcgacggggtgtacggcgaccgcaac
cttgtgtgcagctgcccgccgatcgaggcctacagcagctga
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