Gordonia sp. JH63: GR168_14495
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Entry
GR168_14495 CDS
T10304
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
goj Gordonia sp. JH63
Pathway
goj00470
D-Amino acid metabolism
goj00550
Peptidoglycan biosynthesis
goj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GR168_14495 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GR168_14495 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
goj01011
]
GR168_14495 (murD)
Enzymes [BR:
goj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GR168_14495 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
goj01011
]
Precursor biosynthesis
Amino acid ligase
GR168_14495 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QHD86445
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Position
complement(3266244..3267827)
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AA seq
527 aa
AA seq
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MADRPAAVPTPGGPDPRALAGRTVVVGGAGTAGLSATRFLVTLGANVLLADDRFAGADAP
PVDRNAAAAAVAGVAELMSQGVEPVAVADLLTGPGRLATATVVIVSPGFAPTHHLVAAAA
TAGVPVWGEVELAWRVDVAGLLGEPRTWLVVTGTNGKTTTTSMLAGIVEASGRTGAACGN
IGLPVLDAMQAEPRVDVLCAELSSFQLYWAPSVRPQAGVVLNVAEDHLDWHGTFEAYALA
KAGALRGAVSVVGLDDPVASGLPAAGRRIGFTLREPQPGQLGVANGVLIDRAFDAGRLYD
ADEVRPAGPSGVADALAASALALAAGIGPEAIRAGLASFRPAGHRGEVVASRNGIDFVDD
SKATNPHAAQAAVAAFDRVVLIAGGLLKGASMDEMLTAVGDRLAGVVAIGRDRDLVIEAI
ARHAPEVPTVTVFTGDDGTVNVHRPGQAGPQASAVDLPGTGSSTSVAVMDRAVEEAWVLA
EASPSAPDAVLLAPAAASLDMFAGYGVRGDAFAAAARRIAGSPDTGR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcgcccggcggcggtcccgacccccggaggtcccgacccacgcgccctggcc
ggccggaccgtggtggtcggcggggcggggaccgcggggttgtccgccacccggttcctg
gtgacgctcggtgcgaatgtcctgctcgccgacgaccggttcgccggtgctgacgcgccg
cccgtcgaccggaacgccgcggccgcggcggtcgccggggtcgccgaactgatgtcgcag
ggcgtcgaaccggtcgccgtcgcggatctgctcaccggtcccgggcgactggcgacggcc
acggtcgtgatcgtgtcacccggcttcgcgcccacccaccacctggtggcggccgcggcc
accgccggcgtcccggtctggggcgaggtcgaactggcctggcgcgtggacgtcgcggga
ctgctgggcgaaccacgcacctggcttgtcgtgaccggcaccaacggcaagacgacgacc
acgtcgatgctcgccgggatcgtcgaggcatcgggccgcacgggtgcggcctgcggcaac
atcgggctcccggtgctcgacgcgatgcaggccgagcccagggtggacgtgctgtgtgcg
gaactgtcgtcattccagctgtattgggcgccgtcggtccgtccgcaagcgggagtcgtg
ctgaacgtggccgaggatcacctcgactggcatgggacgttcgaggcgtacgcacttgcc
aaggcgggagcgctgcgcggtgcggtgagtgtcgtcggactggacgacccggtcgcgtcc
ggcctgcccgccgcgggccgccgcatcggtttcacgctgcgcgagccgcagcccggacag
ctcggcgtcgcgaacggtgtgctgatcgaccgcgccttcgacgcgggccggttgtacgac
gccgacgaggtgcgtccggccggaccgtcgggtgtcgccgatgcgctggccgcgtcggct
ctcgcgctcgcggccggcatcgggccggaggcgatacgggcggggctggcgtccttccgg
ccggccggtcatcgcggcgaggtcgtcgcctcgcggaacgggatcgacttcgtcgacgac
tccaaggccaccaacccccacgcagcccaggcggcggtcgccgccttcgaccgagtcgtg
ctgatcgcgggcggtctgctcaagggggcgtcgatggacgagatgctcaccgcggtgggc
gatcggctggccggggtggtcgcgatcggccgtgaccgagacctggtgatcgaggcgatc
gcgcgacacgccccagaagtcccaacagtcacagtattcacaggggacgatggcacggtg
aacgtgcatcgtccgggacaggccggtccccaagcctcagcagttgatctcccggggacg
ggctcctcgacatcggtggcggtcatggaccgggccgtcgaggaggcgtgggtgctcgcg
gaggcgagcccgtccgcgcccgacgccgtgctgctcgcacccgcggcggcctcgctggac
atgttcgccggatacggcgtgcgcggtgacgcgttcgccgccgccgcgcgtcggatcgcc
ggctcgcccgacaccggacgctga
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