Gordonia sp. JH63: GR168_14630
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Entry
GR168_14630 CDS
T10304
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
goj Gordonia sp. JH63
Pathway
goj00061
Fatty acid biosynthesis
goj00071
Fatty acid degradation
goj01100
Metabolic pathways
goj01212
Fatty acid metabolism
goj02024
Quorum sensing
goj04146
Peroxisome
Module
goj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GR168_14630
00071 Fatty acid degradation
GR168_14630
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GR168_14630
09145 Cellular community - prokaryotes
02024 Quorum sensing
GR168_14630
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
goj01004
]
GR168_14630
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
goj04147
]
GR168_14630
Enzymes [BR:
goj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GR168_14630
Lipid biosynthesis proteins [BR:
goj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GR168_14630
Exosome [BR:
goj04147
]
Exosomal proteins
Exosomal proteins of breast milk
GR168_14630
Exosomal proteins of breast cancer cells
GR168_14630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Phage_tail_tube_init
Motif
Other DBs
NCBI-ProteinID:
QHD86469
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All DBs
Position
3295313..3297121
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AA seq
602 aa
AA seq
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MGEYSVPAKFSIGDDENCTNIIFGLAQRSPQHIVFRHKQGDRWEPVTAAEAASRISAIAK
GLIASGVNPGDRVALLSRTRLEWNLFDFAIWSAGAITVPIYDSSSAGQIEWIMQDSGAVA
IVLEDDGHRAEFESIDSLTTPVTVFQIDRTDGPGAVGELVAAGADVHDDEVAARRATVKA
ADPATLIYTSGTTGRPKGCELTHANMLSEVRAVLAGDLLDQVIARDEKRLLMFLPLAHVL
ARAITLVAIEAGAEVGHTSDIPNLVDEFAVFKPSLILSVPRVFEKVYNTARQKAHDGGKG
KIFDAASETAIAYSKAKEKGQVGLALKVKHGVFDALVYKKLRAALGGECQMAISGGAPLG
ARLGHFFSGVGVPVYEGYGLTETTAAFSVNTPSASKIGSVGKPLSGNAVRIGDDGEVLLR
GGVVFTEYWQNPEATASAVVDGWFHTGDLGTVDADGFITITGRKKELIVTAGGKNVSPAG
LEDVIRANALISQATVVGDAKPFVAALITIDPEAFPAWKERTGKPAMATVADLADDADLR
AEVQSAVDLANKTVSHSEAIKKFRILPTDFTEETGEMTPTLKVKRNVVVEKFAGDIEAIY
QR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtacagcgtgcccgcgaagttctcgatcggcgacgacgagaactgcacgaac
atcatcttcggcctggcgcagcggtcaccgcagcacatcgtgttccgccacaagcagggc
gaccggtgggagccggtcaccgccgccgaggccgcctcccgcatctccgccatcgccaag
ggcctgatcgcctccggcgtcaaccccggggaccgggttgcgctgctgtcgcgcacccgc
ctcgagtggaatctcttcgacttcgcgatctggtccgcgggcgcgatcaccgtgcccatc
tacgattcgtcctccgccggccagatcgaatggatcatgcaggattccggtgcggtcgcg
atcgtcctggaggacgacggacatcgcgccgagttcgagtccatcgactccctgaccacg
ccggtgaccgtcttccagatcgaccgcaccgacgggccgggtgccgtcggcgagctcgtc
gccgccggtgccgacgtccacgacgacgaggtcgcggcccgccgggccaccgtcaaggcc
gccgacccggcgacgctgatctacacctcggggaccaccggccgccccaagggctgcgaa
ctcacccacgccaacatgctgtcggaggtgcgggcggtcctcgccggcgacctcctcgat
caggtcatcgcccgcgacgagaagcgtctgctgatgttcctgcccctcgcccacgtcctc
gcgcgcgccatcactctcgtcgcgatcgaggccggcgccgaagtcgggcacaccagcgac
atcccgaacctcgtcgacgaattcgccgtcttcaaaccgtcgctcatcctgtccgtgccg
cgcgtgttcgagaaggtctacaacaccgcccgccagaaggcccacgacggcggcaagggc
aagatcttcgacgccgcgtccgagaccgcgatcgcgtactcgaaggcgaaggagaagggg
caggtcggtctcgcgctgaaggtcaagcacggcgtcttcgacgcgctcgtctacaagaag
ctccgggccgccctcggcggcgagtgccagatggcgatctccggcggcgcgccgctcggc
gcccggctgggccatttcttctccggcgtcggcgtgccggtgtacgagggttacggcctc
accgagaccacggccgcgttcagcgtgaacacgccgtcggcgtcgaagatcggcagtgtc
ggaaaaccgttgtcgggcaatgccgttcggatcggtgacgatggtgaggtgctgttgcgc
ggcggggtcgtcttcaccgagtactggcagaaccccgaggcgaccgcatccgcggtcgtc
gacggctggttccataccggcgacctcggcaccgtcgacgccgacggcttcatcaccatc
accggccgcaagaaggaactgatcgtgaccgcgggcggcaagaacgtctcccccgccgga
ctcgaggacgtcatccgcgccaacgccctgatctcgcaggccaccgtcgtcggtgacgcg
aaaccgtttgtggccgccctgatcacgatcgatccggaggcgtttccggcgtggaaggag
cgcaccggcaagccggcaatggcgacggtcgcggacctcgccgacgacgccgacctgcgc
gccgaggtccagtcggctgtcgacctcgccaacaagacggtgtcacattcagaggccatc
aagaagttccgcatcctgccgaccgacttcacggaggagaccggcgagatgacgccgacc
ctcaaggtcaagcgcaacgtcgtcgtggagaagttcgccggcgacatcgaggcgatctac
cagcggtga
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