Gordonia sp. JH63: GR168_15515
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Entry
GR168_15515 CDS
T10304
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
goj Gordonia sp. JH63
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goj03032
]
GR168_15515
03036 Chromosome and associated proteins [BR:
goj03036
]
GR168_15515
03400 DNA repair and recombination proteins [BR:
goj03400
]
GR168_15515
DNA replication proteins [BR:
goj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GR168_15515
Chromosome and associated proteins [BR:
goj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GR168_15515
DNA repair and recombination proteins [BR:
goj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GR168_15515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HC2
Motif
Other DBs
NCBI-ProteinID:
QHD86633
LinkDB
All DBs
Position
complement(3478447..3479076)
Genome browser
AA seq
209 aa
AA seq
DB search
MNKAELIDELTKKLDADRKTATEAVELVVDTIVRAVNKGESVTITGFGVFEKRKRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLSATGPAVKRGSGATTTAAKKAAPAK
KTAAKKTTAAAKKTTAAKKAPAKTTAAKKTTTAAKKAPAKTTAAKKTTTAAKKAPAKKAA
PAKKATAAKKAPAKKTAAKKTAAKKTTRR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggagctcattgatgagctgaccaagaagctcgacgcggatcgcaagact
gcgactgaagccgtcgagctcgtcgtcgacacgatcgtgcgcgcggtcaacaagggcgag
agcgtgacgatcaccggcttcggcgtattcgagaagcggaagcgcgcaccgcgcgtcgcc
cgtaacccgcgcaccggcgagaccgtcaaggtccgcgcgacctcggtgccggcgttccgt
ccgggcgctcagttcaaagccgttgtggcgggcaagcagaagctgtccgcgaccggtccg
gctgtgaagcgcggaagcggagccaccaccacggcagccaagaaggctgcgccggcgaag
aagaccgccgccaagaagacgaccgccgccgccaagaagaccaccgcggcgaagaaggcc
ccggccaagaccacggcggccaagaagaccaccaccgcggcgaagaaggctccggccaag
accacggcggccaagaagaccaccaccgcggcgaagaaggctccggccaagaaggcggcg
ccggcgaagaaggccaccgccgcaaagaaagctccggccaagaagactgccgcgaagaag
accgcggcgaagaagaccacccgtcgctga
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