KEGG   Gordonia sp. JH63: GR168_16320
Entry
GR168_16320       CDS       T10304                                 
Name
(GenBank) PDZ domain-containing protein
  KO
K08372  putative serine protease PepD [EC:3.4.21.-]
Organism
goj  Gordonia sp. JH63
Pathway
goj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:goj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GR168_16320
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:goj01002]
    GR168_16320
Peptidases and inhibitors [BR:goj01002]
 Serine peptidases
  Family S1: chymotrypsin family
   GR168_16320
SSDB
Motif
Pfam: Trypsin_2 Trypsin PDZ_2 PDZ PDZ_6 Peptidase_S46 PDZ_Tricorn
Other DBs
NCBI-ProteinID: QHD86769
LinkDB
Position
3646624..3647982
AA seq 452 aa
MRRRHRGAVNTPQTPMPDDDHDPITEPFAPPRGPVPPPGPWAMNPQATPPPFVSPPPPPP
VARQRAGVTKPIIVTALLAGLLGGAVGMGGSSLLGHDAASVPILNSQPAAAANAADAQPG
SVTYAASVASKSTADIKVQTANGTAVGSGIVLSPDGYVLTNHHVVAGAGSGSTIVVTTGD
GHQHNATVTGNAPSYDLAVIKLEGASGLTPATLGDSDALKVGQQVVAVGSPDSLTNTVTS
GIVSALSRTVTAGDASGSSLTVYNGLQTDTPINPGNSGGPLVNLQGQVIAVNSAVDTGQA
ASGGPQSFGLGFAIPINTAKRIANQLLQDGQATKPVMGVSGSLSAGDRTEGATVSSVQRG
GPAADAGIREGDVITKIGDTTVSDYADLMAQILTHEPGETVPVTTGSGSGAWTVQVKLGS
AVDEQETTVPESGSGSGGSPLPFGGNPFGQNP
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgaggcgcaggcatcgtggtgccgtgaacacgccccagacccccatgcccgacgacgac
cacgacccgatcaccgaaccctttgcgccgccgcgcggaccggtgccgccgcccgggccc
tgggcgatgaacccgcaggccaccccgccgccgttcgtctcacccccgccgcctcctccg
gtcgcgcggcagcgggccggcgtgacgaagccgatcatcgtcaccgcgctcctcgcggga
ctgctcggcggcgccgtcggcatgggaggcagttcgctgctcgggcacgacgccgcgtcg
gtaccgatcctcaactcgcaaccggccgccgcggccaatgccgccgacgcgcaacccggt
tcggtgacgtatgccgcgagcgtggcgtcgaagtcgacggccgacatcaaggtccagacc
gcgaacggaaccgcggtgggcagcggcatcgtcctctcccccgacggttacgtcctgacg
aaccaccacgtcgtcgccggggccggctccggcagcacgatcgtcgtcaccaccggcgac
gggcatcagcacaacgccaccgtcaccgggaacgccccgtcatacgatctcgcggtcatc
aagctcgagggtgcgtcgggattgaccccggcgacactcggtgattcggatgcgctgaag
gtcggccagcaggtggtcgccgtcggcagcccggacagcctgaccaacacggtgacgtcc
ggcatcgtcagcgcgctgtcgcgtacggtgaccgccggcgacgccagtggttcgtcgctc
accgtgtacaacggtctgcagaccgacacccccatcaaccccggcaattccggtgggcca
ctggtgaatctgcaggggcaggtgatcgcggtcaattcggcggtggacaccggccaggcc
gcgtccggtggaccgcagtccttcgggttgggtttcgcgatcccgatcaacaccgccaag
cgcatcgccaatcaactgttgcaggacggtcaggccaccaaacccgtgatgggagtgtcg
ggttcactgtcggcgggcgaccggaccgagggcgcgaccgtctcgtcggtgcagcgtggc
gggcccgcggcagacgcgggtatccgagagggcgacgtcatcaccaagatcggggacacc
accgtctccgactacgccgacctcatggcgcaaatcctcacccacgagccgggtgagacc
gtgccggtgaccaccggttccggttcgggtgcctggacggtccaggtgaagctgggcagt
gccgtcgacgagcaggagacgacggtgccggaatccggcagcggatcgggcggttccccg
ttgccgttcggcggcaaccccttcggccagaacccctga

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