Gordonia sp. JH63: GR168_18005
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Entry
GR168_18005 CDS
T10304
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
goj Gordonia sp. JH63
Brite
KEGG Orthology (KO) [BR:
goj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
goj03000
]
GR168_18005
Transcription factors [BR:
goj03000
]
Prokaryotic type
Helix-turn-helix
Other families
GR168_18005
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
AAA
AAA_22
AAA_16
HTH_30
AAA_28
HTH_50
nSTAND3
HTH_28
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QHD87063
LinkDB
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Position
4055911..4057548
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AA seq
545 aa
AA seq
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MGIDTLHRTSDSSPRRPVIESSWRRSELSGVRPEDRTPTQVQDIAAADPLLDAARPVLDD
AAARLADTDVSLLLVDHECRMVTRVAFGTTVERRLDAIGASPGVPFGEDVVGTTALGTPA
ETRGGIVVNSSEHYLDQFKSISCFGQPIIHPATRRLAGIICMSEIADRINPLAIPVVNGI
VADIADRLLDRSRAHQRRVLDAFQRAAPRRDLAVAAIGDDLQLTNALAAELLSPTDIGAM
RIVATDPALRATVLPLTLVSGAEVEVAVEPVPGACGAALFRFRPVSEPPPRRSAPPTAPS
RTSVAITGEPGTGRSTHAAALAAETDSPPVIVDVADEIISGRRPDIPAFVGRARSMSTTL
VIDGVDLLDAQSVALLGRVAVSSSPESPLIVVGGPRDQASPGVAALLARCATRVDLAPLR
HRTSELASIASSALTDIDPELTLSGLATDALLCDDWPGNLTELNSVLRQAALTCRARAAR
VVEPADLPPAYRTTSRAAHLSGREQAERTAIVEALDRARGNKVHAARDLGISRTTLYSRM
RALDI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgggtatcgacacgttgcaccgcacctccgattcgtcgccccgacggcccgtcatcgag
tcgtcgtggcgtcgttcggagctgtccggggtccgccccgaggaccggacgccgacgcag
gtccaggacatcgctgccgccgacccgctgctcgacgccgcccgcccggtcctcgatgac
gccgccgcccgactcgccgacaccgatgtctcgctgctgctcgtcgaccacgagtgccgg
atggtgacgcgggtggcgttcggcacgaccgtggagcgccgtctcgacgcgatcggcgcc
tcgccgggcgtgccgttcggcgaggacgtcgtcgggacgacggccctcggtaccccggcg
gagacccggggcgggatcgtcgtgaacagctccgagcactacctggaccagttcaagtcg
atcagttgcttcggacagccgatcatccatcccgcgacccgcaggctggccgggatcatc
tgcatgtccgagatcgccgatcgcatcaaccccttggcgatcccggtcgtcaacgggatc
gtcgccgacatcgccgaccgcctgctggaccggtcgcgagcgcaccagcgacgcgtcctc
gacgcgttccagcgcgccgcaccgcgtcgcgacctcgccgtcgcggccatcggcgacgac
ctccagctcacgaatgcccttgctgccgaactgctctcccccaccgacatcggcgcgatg
cggatcgtcgcgaccgatcccgcactgcgcgcgacagtactgccgctgaccctggtgtcg
ggcgccgaggtcgaggtcgccgtcgaacccgtgccgggcgcctgcggcgcggccctgttc
cgcttccggccggtcagcgagccgccgccgaggcggtccgcgccaccgaccgccccgtcc
cgcaccagcgtcgcgatcaccggcgaaccggggaccggacgcagcacccacgccgctgcg
ctcgccgccgagaccgactcgccaccggtgatcgtcgatgtcgccgacgagatcatcagc
ggtcgtcgccccgacatccccgcgttcgtcggacgcgcccggtcgatgagcacgaccctg
gtgatcgacggcgtcgatctcctcgacgcgcagtcggtcgccctactcgggcgcgtggcg
gtgtcgagctcgccggagtcgccgctgatcgtcgtcggcgggccgcgcgaccaggcgagt
ccgggagtcgccgcactcctcgcccggtgcgccacacgggtcgatctcgctcctctacgt
catcggacctcggagctggcgtcgatcgcgagcagcgcactgacagacatcgacccggag
ctcacgctgtccggactggcgacggacgccttgctgtgcgacgactggcccgggaacctc
accgagctcaactcggtgctccggcaggccgctctgacgtgccgagcgcgcgccgcgcgg
gtcgtcgaacccgccgacctgccacccgcctatcggacgaccagccgggccgcgcacctg
tccggccgggaacaggccgagcgcaccgcgatcgtcgaggcgctggaccgcgcccgcggc
aacaaggtgcatgccgcaagggatctcggcatcagccggacgacgctgtactcgcggatg
cgcgcactggacatctga
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