Gordonia insulae: D7316_00398
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Entry
D7316_00398 CDS
T05722
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gom
Gordonia insulae
Pathway
gom03030
DNA replication
gom03410
Base excision repair
gom03420
Nucleotide excision repair
gom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7316_00398 (polA)
03410 Base excision repair
D7316_00398 (polA)
03420 Nucleotide excision repair
D7316_00398 (polA)
03440 Homologous recombination
D7316_00398 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gom03032
]
D7316_00398 (polA)
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_00398 (polA)
Enzymes [BR:
gom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D7316_00398 (polA)
DNA replication proteins [BR:
gom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D7316_00398 (polA)
DNA repair and recombination proteins [BR:
gom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D7316_00398 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7316_00398 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HAD
DNA_pol_lambd_f
HHH_5
HHH_2
Imm50
Motif
Other DBs
NCBI-ProteinID:
AZG43827
UniProt:
A0A3G8JFG3
LinkDB
All DBs
Position
399842..402610
Genome browser
AA seq
922 aa
AA seq
DB search
MSPAKSSTAPAKQSTGKDGQPVLMLLDGHSLAYRAFFALPAENFKTASGQTTNAVYGFTS
MLINLLRDEGPTHIAAAFDVSRKTFRSEMFPEYKAQRSKSPDEFNGQVDLTKEVLDALGI
PVMAIEGFEADDIIATLATQAEAEGYKVLIVTGDRDSLQLVDDSVTVLYPRKGVSDLTRF
TPEEVEKKYGLTPAQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDE
VKGKVGDALRAHLASVQTNRQLTELIRDMQLPAGPDELAMVGWDRDRIHQLFDDLEFRVL
RDRLFSTLTSVEPEAESGFDLDGTILGAGEVRAWLDEHTKTGRTGVAVTSPHLVVGADAT
GIALAAADEASAFIDVTTLDADDEQALAAWLADPELPKALHEAKWAMHAVRARGWLLAGV
TSDTSLAAYLVRPGQRTFNLDDLALRYLRRELRDDAAPDDGQMSLLDEDAGDAKAAEHQM
LEARAVAELADTLDIELDRIDSKPLLTEMELPLLFVLAELEAAGIAVDVDHFGELESTFS
QRIRTAADAAYDVIGEQINLGSPKQLQTVLFDKLDMPKTKKTKTGYTTDADALQGLYEKT
EHPFLAHLLEHRDATRLKVTVDGLLKSVADDGRVHTTFNQTVAATGRLSSTEPNLQNIPV
RTEAGREIRQGFIVGTGSGASGPGVSGATDYDCLMTADYSQIEMRIMAHLSEDAGLIEAF
NTGEDLHNFVGSRAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDEAKEQ
MEAYFARFGGVRDYLHNVVDEARRNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAP
IQGSAADIIKVAMINVYGRLRDEKLRSRMLLQVHDELIVEVAAGERDAVEAVVREEMGNA
ITLSVPLEVSVGFGRSWDDAAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgcgaagagttcgacagcacccgcgaagcagtcaaccggcaaggacgggcag
ccggtcctgatgctgctcgacggacattccctggcctaccgggccttcttcgcgctaccc
gcggagaatttcaagacggcgtccggtcagaccaccaacgccgtctacggcttcacctcg
atgctgatcaacctgctgcgcgacgagggccccacccacatcgccgctgccttcgacgtg
tcgcgtaagaccttccgctccgagatgttccccgagtacaaggcccagcgatccaagtcg
cccgatgagttcaacgggcaggtcgacctcaccaaggaggtgctcgacgcgctgggcatc
ccggtgatggccatcgagggattcgaggccgacgacatcatcgccaccctcgcgacgcaa
gccgaggccgagggctacaaggtcctgatcgtgaccggcgaccgcgactcgctccagctc
gtcgacgactcggtcaccgtgctctacccgcgcaagggagtctcggacctgacgcggttc
acgccggaagaggtggagaagaagtacggactcaccccggcgcagtatcccgactacgcg
gcattgcgcggcgaccccagcgacaacctccccggtatccccggggtgggggagaagacc
gcgtcgaaatggatccgcgagtacgggtcactcgcgtcgctggtcgaccacgtcgacgag
gtcaagggcaaggtcggggatgcgctgcgcgcgcacctcgcgtccgtgcagaccaaccgc
caactcaccgagctgatccgcgacatgcagctgccggccgggcccgacgaactggccatg
gtcgggtgggaccgcgaccgcatccaccaactcttcgacgacctcgagttccgcgtactc
cgcgatcggctgttctccacgctgacttccgttgagccggaagcggaatcgggtttcgac
ctcgacggcacgatcctcggtgcgggtgaggtccgggcgtggctcgacgagcacacgaag
accggccgtaccggggtcgcggtgacgtcgccgcacctggtcgtcggcgccgacgccacc
ggcatcgccctggccgcggccgacgaggcctccgcgttcatcgacgtgaccaccctggac
gccgacgacgaacaggcgctggccgcgtggctggccgaccccgaactgcccaaggcattg
cacgaggcgaagtgggcgatgcacgcggtccgcgcgcggggttggctgctcgcgggtgtc
accagcgacacgtcgctggccgcctacctggtgcgaccgggtcagcggacgttcaacctc
gacgatctcgccctgcgttatctgcgccgtgaactccgtgacgacgccgcaccggacgac
ggccagatgtcgctgctcgacgaggacgccggcgacgccaaggcggccgagcaccagatg
ctcgaggcgcgtgccgtcgccgagctcgccgacaccctggacatcgaactcgaccgtatc
gactccaaaccactgctcaccgagatggagttgccgctgctgttcgtcctcgccgaactc
gaggcggccggcatcgcggtggacgtcgaccacttcggtgagttggaaagcacgttctcc
caacgcatccggaccgccgccgacgccgcctacgatgtgatcggggaacagatcaacctc
ggctcgccgaagcagttgcagaccgtgctgttcgacaagctcgacatgccgaagaccaag
aagaccaagaccggctacaccaccgatgccgacgcattgcagggcctgtacgagaagacc
gagcatccgttcctggcgcacctgctcgaacatcgcgatgcgacgcggctcaaggtcacc
gtcgacggcctgctcaagtccgtcgccgacgacgggcgggtgcacaccacgttcaaccag
accgtcgcggccaccggccgactgtcctcgaccgaacccaacctgcagaacatcccggtc
cgcaccgaggccggccgcgagatccggcagggtttcatcgtcgggacggggagcggagcg
agcgggccgggagtctccggcgcgaccgactacgactgcctgatgaccgccgactacagc
cagatcgagatgcggatcatggcccatctgtcggaggacgccggactgatcgaggcgttc
aacaccggtgaggatctgcacaatttcgtcgggtcgcgggcattcggcgtgccgatcgac
gaggtcaccaccgagatgcggcaccgggtgaaggcgatgtcgtacgggctggcgtacgga
ctgagcgcgttcggtctcgcggcgcagctgaagatcagccgcgacgaggccaaggaacag
atggaggcctacttcgcgcggttcggtggggtgcgtgactatctgcacaacgtcgtcgac
gaggcgcgccgcaacgagtacaccgcgacgctgttcgggcgccgtcgctatctgcccgac
ctcaacagcgacaactggcagcgtcgacagtccgccgaacggatggcgctcaacgccccc
atccagggttcggcggcggacatcatcaaggtcgcgatgatcaacgtctacggacgtctt
cgcgacgagaaactgcggtcacggatgttgctgcaggtgcacgacgaattgatcgtcgag
gtcgccgcgggggagcgcgatgcggtggaggcggtggtccgcgaggagatgggcaacgcc
atcaccctgtccgtgccgttggaggtctcggtgggattcggtcgctcctgggacgacgcg
gcgcactga
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