KEGG   Gordonia insulae: D7316_00398
Entry
D7316_00398       CDS       T05722                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
gom  Gordonia insulae
Pathway
gom03030  DNA replication
gom03410  Base excision repair
gom03420  Nucleotide excision repair
gom03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D7316_00398 (polA)
   03410 Base excision repair
    D7316_00398 (polA)
   03420 Nucleotide excision repair
    D7316_00398 (polA)
   03440 Homologous recombination
    D7316_00398 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gom03032]
    D7316_00398 (polA)
   03400 DNA repair and recombination proteins [BR:gom03400]
    D7316_00398 (polA)
Enzymes [BR:gom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D7316_00398 (polA)
DNA replication proteins [BR:gom03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     D7316_00398 (polA)
DNA repair and recombination proteins [BR:gom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     D7316_00398 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D7316_00398 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HAD DNA_pol_lambd_f HHH_5 HHH_2 Imm50
Other DBs
NCBI-ProteinID: AZG43827
UniProt: A0A3G8JFG3
LinkDB
Position
399842..402610
AA seq 922 aa
MSPAKSSTAPAKQSTGKDGQPVLMLLDGHSLAYRAFFALPAENFKTASGQTTNAVYGFTS
MLINLLRDEGPTHIAAAFDVSRKTFRSEMFPEYKAQRSKSPDEFNGQVDLTKEVLDALGI
PVMAIEGFEADDIIATLATQAEAEGYKVLIVTGDRDSLQLVDDSVTVLYPRKGVSDLTRF
TPEEVEKKYGLTPAQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDE
VKGKVGDALRAHLASVQTNRQLTELIRDMQLPAGPDELAMVGWDRDRIHQLFDDLEFRVL
RDRLFSTLTSVEPEAESGFDLDGTILGAGEVRAWLDEHTKTGRTGVAVTSPHLVVGADAT
GIALAAADEASAFIDVTTLDADDEQALAAWLADPELPKALHEAKWAMHAVRARGWLLAGV
TSDTSLAAYLVRPGQRTFNLDDLALRYLRRELRDDAAPDDGQMSLLDEDAGDAKAAEHQM
LEARAVAELADTLDIELDRIDSKPLLTEMELPLLFVLAELEAAGIAVDVDHFGELESTFS
QRIRTAADAAYDVIGEQINLGSPKQLQTVLFDKLDMPKTKKTKTGYTTDADALQGLYEKT
EHPFLAHLLEHRDATRLKVTVDGLLKSVADDGRVHTTFNQTVAATGRLSSTEPNLQNIPV
RTEAGREIRQGFIVGTGSGASGPGVSGATDYDCLMTADYSQIEMRIMAHLSEDAGLIEAF
NTGEDLHNFVGSRAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDEAKEQ
MEAYFARFGGVRDYLHNVVDEARRNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAP
IQGSAADIIKVAMINVYGRLRDEKLRSRMLLQVHDELIVEVAAGERDAVEAVVREEMGNA
ITLSVPLEVSVGFGRSWDDAAH
NT seq 2769 nt   +upstreamnt  +downstreamnt
gtgagccccgcgaagagttcgacagcacccgcgaagcagtcaaccggcaaggacgggcag
ccggtcctgatgctgctcgacggacattccctggcctaccgggccttcttcgcgctaccc
gcggagaatttcaagacggcgtccggtcagaccaccaacgccgtctacggcttcacctcg
atgctgatcaacctgctgcgcgacgagggccccacccacatcgccgctgccttcgacgtg
tcgcgtaagaccttccgctccgagatgttccccgagtacaaggcccagcgatccaagtcg
cccgatgagttcaacgggcaggtcgacctcaccaaggaggtgctcgacgcgctgggcatc
ccggtgatggccatcgagggattcgaggccgacgacatcatcgccaccctcgcgacgcaa
gccgaggccgagggctacaaggtcctgatcgtgaccggcgaccgcgactcgctccagctc
gtcgacgactcggtcaccgtgctctacccgcgcaagggagtctcggacctgacgcggttc
acgccggaagaggtggagaagaagtacggactcaccccggcgcagtatcccgactacgcg
gcattgcgcggcgaccccagcgacaacctccccggtatccccggggtgggggagaagacc
gcgtcgaaatggatccgcgagtacgggtcactcgcgtcgctggtcgaccacgtcgacgag
gtcaagggcaaggtcggggatgcgctgcgcgcgcacctcgcgtccgtgcagaccaaccgc
caactcaccgagctgatccgcgacatgcagctgccggccgggcccgacgaactggccatg
gtcgggtgggaccgcgaccgcatccaccaactcttcgacgacctcgagttccgcgtactc
cgcgatcggctgttctccacgctgacttccgttgagccggaagcggaatcgggtttcgac
ctcgacggcacgatcctcggtgcgggtgaggtccgggcgtggctcgacgagcacacgaag
accggccgtaccggggtcgcggtgacgtcgccgcacctggtcgtcggcgccgacgccacc
ggcatcgccctggccgcggccgacgaggcctccgcgttcatcgacgtgaccaccctggac
gccgacgacgaacaggcgctggccgcgtggctggccgaccccgaactgcccaaggcattg
cacgaggcgaagtgggcgatgcacgcggtccgcgcgcggggttggctgctcgcgggtgtc
accagcgacacgtcgctggccgcctacctggtgcgaccgggtcagcggacgttcaacctc
gacgatctcgccctgcgttatctgcgccgtgaactccgtgacgacgccgcaccggacgac
ggccagatgtcgctgctcgacgaggacgccggcgacgccaaggcggccgagcaccagatg
ctcgaggcgcgtgccgtcgccgagctcgccgacaccctggacatcgaactcgaccgtatc
gactccaaaccactgctcaccgagatggagttgccgctgctgttcgtcctcgccgaactc
gaggcggccggcatcgcggtggacgtcgaccacttcggtgagttggaaagcacgttctcc
caacgcatccggaccgccgccgacgccgcctacgatgtgatcggggaacagatcaacctc
ggctcgccgaagcagttgcagaccgtgctgttcgacaagctcgacatgccgaagaccaag
aagaccaagaccggctacaccaccgatgccgacgcattgcagggcctgtacgagaagacc
gagcatccgttcctggcgcacctgctcgaacatcgcgatgcgacgcggctcaaggtcacc
gtcgacggcctgctcaagtccgtcgccgacgacgggcgggtgcacaccacgttcaaccag
accgtcgcggccaccggccgactgtcctcgaccgaacccaacctgcagaacatcccggtc
cgcaccgaggccggccgcgagatccggcagggtttcatcgtcgggacggggagcggagcg
agcgggccgggagtctccggcgcgaccgactacgactgcctgatgaccgccgactacagc
cagatcgagatgcggatcatggcccatctgtcggaggacgccggactgatcgaggcgttc
aacaccggtgaggatctgcacaatttcgtcgggtcgcgggcattcggcgtgccgatcgac
gaggtcaccaccgagatgcggcaccgggtgaaggcgatgtcgtacgggctggcgtacgga
ctgagcgcgttcggtctcgcggcgcagctgaagatcagccgcgacgaggccaaggaacag
atggaggcctacttcgcgcggttcggtggggtgcgtgactatctgcacaacgtcgtcgac
gaggcgcgccgcaacgagtacaccgcgacgctgttcgggcgccgtcgctatctgcccgac
ctcaacagcgacaactggcagcgtcgacagtccgccgaacggatggcgctcaacgccccc
atccagggttcggcggcggacatcatcaaggtcgcgatgatcaacgtctacggacgtctt
cgcgacgagaaactgcggtcacggatgttgctgcaggtgcacgacgaattgatcgtcgag
gtcgccgcgggggagcgcgatgcggtggaggcggtggtccgcgaggagatgggcaacgcc
atcaccctgtccgtgccgttggaggtctcggtgggattcggtcgctcctgggacgacgcg
gcgcactga

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