Gordonia insulae: D7316_00523
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Entry
D7316_00523 CDS
T05722
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gom
Gordonia insulae
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gom03019
]
D7316_00523 (orn)
03009 Ribosome biogenesis [BR:
gom03009
]
D7316_00523 (orn)
Messenger RNA biogenesis [BR:
gom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D7316_00523 (orn)
Ribosome biogenesis [BR:
gom03009
]
Eukaryotic type
Pre-60S particles
RNases
D7316_00523 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AZG43946
UniProt:
A0A3G8JFU2
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All DBs
Position
complement(540615..541199)
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AA seq
194 aa
AA seq
DB search
MWIDCEMTGLRLESDKLIEIAALVTDSELNVLGDGVDIVIHASDDDLAAMPDVVTKMHAA
SGLTDEVRASTVTIAEAEKQVLDYIRTQVTTAGAVPLAGNSIATDRGFLARDMPELDAYL
HYRMVDVSSIKELCRRWYPKIYFGQPEKGLAHRALADIRESIRELKYYRAAAFVPLPGPD
VDDLATIVKDLGPA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgtggatcgattgcgagatgaccggcctccgtctcgaatcggacaaattgatcgagatc
gccgcgctcgtcaccgacagcgagctcaatgtcctcggtgacggtgtggacatcgtcatc
cacgcgtccgacgacgacctcgcggcgatgcccgacgtggtcaccaagatgcacgcggca
tcgggtctcaccgacgaagtccgcgcatccacggtgaccatcgccgaggcggagaagcag
gtactcgactacatccgtacgcaggtcaccaccgcaggagcggtgccgctcgccggcaac
tcgatcgccaccgaccggggcttcctcgcgcgcgacatgccagaactcgacgcgtacctg
cactatcggatggtcgacgtgagctccatcaaggaactgtgccgacgctggtatcccaag
atctacttcggacagcccgagaaaggcctcgcccaccgcgcgctggccgacatccgtgag
tccatccgcgagctgaagtactaccgcgcggcggcgttcgtacccctgcccggcccggac
gtcgacgacctcgcgaccatcgtcaaggacctcggacctgcgtga
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