Gordonia insulae: D7316_00678
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Entry
D7316_00678 CDS
T05722
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gom
Gordonia insulae
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gom03016
]
D7316_00678 (truB)
Enzymes [BR:
gom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D7316_00678 (truB)
Transfer RNA biogenesis [BR:
gom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D7316_00678 (truB)
Prokaryotic type
D7316_00678 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AZG44098
UniProt:
A0A3G8JGP8
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All DBs
Position
707531..708445
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AA seq
304 aa
AA seq
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MADLSIENAGLVIVDKDAGMTSHDVVSRCRKLFDTRRVGHAGTLDPMATGVLVVGVERAT
KLLGLLSLTTKSYTATIRLGAATDTDDREGQEISRADATHLTDPEITAGVAALTGDIQQV
PAKVSAIKVDGRRAHSLARTGAEFDLAARPVTVSRFAIREVRHIDGDAAGGYVDLDVEVD
CSAGTYIRSLARDLGAGLGVGGHLTSLRRTEVGPFTLDHARSLATLADGPQLSLTIDEAV
KLSFPHRSIDDDEAESISQGRWLDPVGRKEIYVVIDPAGQAIALVQENGRRASSVMVVRP
ATLR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctgtccatcgagaacgccggactcgtcatcgtcgacaaggacgcgggcatg
accagtcacgacgtcgtgtcccggtgccgaaagctgttcgacaccaggcgcgtcgggcac
gccgggacgctcgatccgatggccaccggggtcctggtcgtcggggtcgaacgcgcgacc
aaactgctggggctgctgtcgctgacgaccaagtcgtacaccgccacgatccgtctcggc
gccgcgaccgacaccgacgaccgggaagggcaggagatctcccgggccgacgccacgcac
ctgaccgacccggagatcaccgccggggtcgccgcactgaccggcgacatccagcaggtg
ccggccaaggtgagtgcgatcaaggtcgacggacgacgtgcacacagtctggcgcgcacc
ggcgccgagttcgacctcgccgcgcgaccggtcacggtgtcgcggttcgcgatccgcgag
gtccgtcatatcgacggcgacgccgcgggcgggtacgtcgacctcgacgtcgaggtcgac
tgttcggccggcacctacatccggtcactggcccgcgatctgggcgccgggctcggtgtc
ggcgggcacctgacgtcgttgcggcgcaccgaggtcgggccgttcaccctcgatcacgcg
cgatcgctggccaccctggccgatggtccgcagctctcgctgacgatcgacgaggcggtg
aagctgtcgtttccgcaccgcagcatcgacgacgacgaggcggagtcgatcagccagggg
cgctggctggatccggtgggccgcaaggagatctatgtggtgatcgacccggcgggacag
gcgatcgcgctggtgcaggagaacgggcgccgcgcgagttcggtgatggtggtccggccc
gcgaccctgcgctga
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