Gordonia insulae: D7316_00682
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Entry
D7316_00682 CDS
T05722
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gom
Gordonia insulae
Pathway
gom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7316_00682 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gom03019
]
D7316_00682 (pnp)
03016 Transfer RNA biogenesis [BR:
gom03016
]
D7316_00682 (pnp)
Enzymes [BR:
gom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D7316_00682 (pnp)
Messenger RNA biogenesis [BR:
gom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D7316_00682 (pnp)
Transfer RNA biogenesis [BR:
gom03016
]
Prokaryotic type
tRNA degradation factors
D7316_00682 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
S1_RRP5
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
AZG44102
UniProt:
A0A3G8JHV9
LinkDB
All DBs
Position
711046..713454
Genome browser
AA seq
802 aa
AA seq
DB search
MAPLRVGSLHVQASPHALLRAETGRPASHNRSRRTRWLTRRDFSIHMTDVNSDVDYDDAI
TEATAVIDNGSFGTRTIRFETGRLALQAAGSVTAYLDDENMLLSTTTASKAPKEHFDFFP
LTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVDGLRNEIQVVVTVM
SLNPNDLYDVVAINAASASTQLAGLPFAGPVGGVRVALIPTEENKAGQWVAFPTVEQLEG
AVFNMVVAGRVVSGQGDTADVAIMMVEAEATDNVLEIIAGGAQAPTEVIVAEGLEAAKPF
IARLCEAQKSLATAAAKETGDFPLFPPYESDVYDAVAGAASDRLGEILTIPGKQERDDKT
DQLKADILAQLGGQFEGREKEIGGAYRSLTKKLVRQRILTDHFRIDGRGITDIRSLSAEV
AVIPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPYSTGETG
RVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTMSLL
NAGVPLKAPVAGIAMGLVSDTVDGETRYVALTDILGAEDAFGDMDFKVAGTKDFVTALQL
DTKLDGIPSQVLAGALNQAKDARLTILDVMAEAIDEPDEMSPYAPRITTIRIPMDKIGEL
IGPKGKTINGITEETGANISIEDDGTVFIGASDGESAQAAIDRVNAIANPQLPKVGERFL
GTVVKTTAFGAFVSLLPGRDGLVHISKLGKGKRVNKVEDVVNVGSKLRVEIADIDDRGKI
SLVPVDEDSASEKAPEAAEANA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggctccgctccgggtcggctccctgcacgtgcaggcgtcgccgcacgctctgctgcgt
gccgagacgggtcgtcccgcatcacacaaccgcagccgccgaacgcggtggctgacacga
agggatttctccatccacatgaccgatgtgaactccgacgtcgactacgacgacgccatc
accgaagccaccgccgtgatcgacaacggcagcttcggcacccgcaccatccgattcgag
accgggcgcctcgcgctgcaggccgccggatcggtcaccgcctacctcgacgacgagaac
atgctcctctcgacgacgaccgcctcgaaggcacccaaggagcacttcgacttcttcccg
ctcaccgtggacgtggaggagcggatgtacgccgccgggcgcatcccgggatcgttcttc
cgtcgtgagggtcgcccgtccaccgacgcgatcctcacctgccgcctgatcgaccggccg
ctgcgtccgaccttcgtcgacggcctgcggaacgagatccaggtcgtcgtcacggtgatg
agcctgaacccgaacgacctctacgacgtcgttgcgatcaacgccgcatcggcgtcgacc
cagctcgccggactgccgttcgccggtcccgtcggcggcgtgcgcgtcgcgctgatcccg
accgaggagaacaaggccggccagtgggtcgccttcccgaccgtcgagcagctcgaaggc
gccgtcttcaacatggtcgtcgcgggccgcgttgtctccggtcaaggagacaccgctgat
gtcgcgatcatgatggtcgaggccgaggccaccgacaacgtcctcgagatcatcgccggc
ggcgcgcaggcaccgaccgaggtgatcgtcgccgagggcctcgaggccgccaagccgttc
atcgcccgactctgcgaggcgcagaagtcgctggcgaccgcagcggccaaggagaccggc
gacttcccgctgttcccgccctacgagagcgacgtctacgacgccgtcgcgggtgccgca
tcggatcgtctcggcgagatcctcacgatccccggcaagcaggaacgcgacgacaagacc
gatcagctcaaggccgacatcctggcccagctcggcggtcagttcgagggtcgcgagaag
gagatcggcggtgcctaccgctcgctgaccaagaagctcgtgcgtcagcgcatcctgacc
gatcacttccgcatcgacggccgcggcatcaccgacatccggtcgctctcggccgaggtc
gcggtcatcccacgggcgcacggcagcgcactgttcgagcgcggcgagacccagatcctg
ggtgtcaccactctcgacatggtcaagatggcccagcagatcgattcgctcggcccggag
acctccaagcgctacatgcatcattacaacttcccgccgtactcgaccggtgagaccggc
cgggtcggttcgccgaagcgtcgcgagatcggccacggcgcgctcgccgagcgtgccctg
atgccggtgctgccgagcgtcgaggagttcccgtacgccatccgccaggtgtcggaggcg
ttgggctccaacggttccacctcgatgggctcggtctgtgcgtcgaccatgtcgctgctc
aacgccggagtgccactcaaggccccggtcgccggcatcgccatgggcctggtgtccgac
accgtcgacggtgaaacccgctacgtggcgctcaccgacatcctcggagccgaggatgcg
ttcggcgacatggacttcaaggtcgccggcaccaaggacttcgtcaccgcgctgcagttg
gacaccaagctcgacggcattccgagtcaggtgctcgcgggtgcgttgaaccaggccaag
gacgcccggctgacgatcctggacgtgatggccgaggccatcgacgagccggacgagatg
agcccgtacgcgccgcggatcaccaccatcaggatcccgatggacaagatcggcgaactg
atcgggcccaagggcaagacgatcaacggcatcaccgaggagaccggcgccaacatctcc
atcgaggacgacggcaccgtgttcatcggggcgtccgacggtgagtcggcgcaggccgcc
atcgatcgggtcaacgcgatcgccaatccgcagctgcccaaggtcggcgagcggttcctc
ggcaccgtggtgaagaccaccgcgttcggtgcgttcgtgtcgctcctgccgggacgtgat
ggcctcgtgcacatctcgaagctcggtaagggcaagcgggtcaacaaggtcgaggacgtc
gtgaacgtcggctccaagctgcgcgtcgagatcgccgacatcgacgatcgcggcaagatc
agcctggtcccggtcgacgaggactcggcatcggagaaggcacccgaggccgccgaggcc
aacgcctga
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