KEGG   Gordonia insulae: D7316_00782
Entry
D7316_00782       CDS       T05722                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
gom  Gordonia insulae
Brite
KEGG Orthology (KO) [BR:gom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gom03016]
    D7316_00782 (rnd)
Enzymes [BR:gom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     D7316_00782 (rnd)
Transfer RNA biogenesis [BR:gom03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    D7316_00782 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: AZG44202
UniProt: A0A3G8JI60
LinkDB
Position
complement(814410..815696)
AA seq 428 aa
MTTGDEQTPVSSPDDRPSPEADEPATTPLLHPADGVPPVLTTASEFADAAAALSGGEGPI
AVDTERASGYRYSQRAYLVQIRRNGAGSFLLDPIEEPDALAPVIAALDGPEWVLHAADQD
LPCLRELGFVCRDLYDTELAGRLLGLAKVNLAAMVAEFLGLGLVKGHGAADWSRRPLPDD
WLNYAALDVEVLVELRDAMDAALVEAGKDGWARQEFRAVLDRPAPAPRADRWRKTSNIHT
VKSARTLAAVRELWTAREELAQKRDVAPGRILPDSAIVTAATADPTSPPELTRLPVFGGP
RQRRQAGIWLAALQRARDLPDDQLPARKAPTVGLPPVNRWDQRNPEAAERAAKVRPVVRE
IAETLQLPVENLLAPDTVRQLCWDGIDLPATVESVDRRLAADGAREWQRGLTAGPIADAL
NSVSDSTD
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgaccaccggtgacgaacagaccccggtgtcctcgccggacgaccggccctcacccgag
gccgacgaaccggccaccacgcccctactacacccggccgacggcgtccctccggtcctg
accaccgcgtccgagttcgccgatgccgccgccgccctgtcaggtggcgagggcccgatc
gcggtcgacaccgaacgcgcctccggctaccgctactcccaacgtgcctatctggtgcag
atccgtcgcaatggtgccggaagcttcctgctcgacccgatcgaggagccggatgcgctc
gcaccggtgatcgcggccctcgacggccccgaatgggtcctgcacgccgccgatcaggat
cttccgtgcctacgggaactcggcttcgtgtgccgggacctgtacgacaccgaactcgcc
ggccggctgctcggcctcgcgaaggtgaacctggcggcgatggtcgccgagttcctcggg
ctggggctcgtcaagggccacggggccgcggactggtcacgcagaccgttgcccgacgac
tggctcaactacgccgccctcgacgtcgaggtgctggtcgagttgcgcgacgcgatggac
gcggcgctcgtcgaggcaggcaaggacgggtgggcgcgccaggagttccgcgcggtcctc
gaccggccggccccggcgccgcgcgccgaccgctggcgcaagacgtcgaacatccacacc
gtcaagagcgcccgcaccctcgccgcggtgcgtgaattatggacggcccgtgaggaactc
gcacagaagcgagacgtggcgcccggccgcatcctgccggactcggcgatcgtcacggcc
gccacggcggacccgacgtcaccgcccgagctcacccggctccccgtgttcggcgggccc
cggcagcgacggcaggccggcatctggctcgccgcgctccagcgggcccgggacctgccc
gacgatcagctgccggcacgcaaggcacccacggtcgggctgcccccggtcaaccggtgg
gatcagcgcaatcccgaggccgcggagcgtgccgcgaaggtccggccggtggtccgggag
atcgccgagaccctgcagttgccggtggagaacctgctggcccccgacacggtgcgccaa
ctctgctgggacggcatcgacctcccggcgaccgtggagtccgtggaccggcggctggcc
gccgacggagcccgggagtggcagcgaggcctgaccgccggcccgatcgcggatgcactc
aacagcgtgtccgactcgacggactga

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