Gordonia insulae: D7316_00782
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Entry
D7316_00782 CDS
T05722
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gom
Gordonia insulae
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gom03016
]
D7316_00782 (rnd)
Enzymes [BR:
gom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
D7316_00782 (rnd)
Transfer RNA biogenesis [BR:
gom03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D7316_00782 (rnd)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AZG44202
UniProt:
A0A3G8JI60
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All DBs
Position
complement(814410..815696)
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AA seq
428 aa
AA seq
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MTTGDEQTPVSSPDDRPSPEADEPATTPLLHPADGVPPVLTTASEFADAAAALSGGEGPI
AVDTERASGYRYSQRAYLVQIRRNGAGSFLLDPIEEPDALAPVIAALDGPEWVLHAADQD
LPCLRELGFVCRDLYDTELAGRLLGLAKVNLAAMVAEFLGLGLVKGHGAADWSRRPLPDD
WLNYAALDVEVLVELRDAMDAALVEAGKDGWARQEFRAVLDRPAPAPRADRWRKTSNIHT
VKSARTLAAVRELWTAREELAQKRDVAPGRILPDSAIVTAATADPTSPPELTRLPVFGGP
RQRRQAGIWLAALQRARDLPDDQLPARKAPTVGLPPVNRWDQRNPEAAERAAKVRPVVRE
IAETLQLPVENLLAPDTVRQLCWDGIDLPATVESVDRRLAADGAREWQRGLTAGPIADAL
NSVSDSTD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggtgacgaacagaccccggtgtcctcgccggacgaccggccctcacccgag
gccgacgaaccggccaccacgcccctactacacccggccgacggcgtccctccggtcctg
accaccgcgtccgagttcgccgatgccgccgccgccctgtcaggtggcgagggcccgatc
gcggtcgacaccgaacgcgcctccggctaccgctactcccaacgtgcctatctggtgcag
atccgtcgcaatggtgccggaagcttcctgctcgacccgatcgaggagccggatgcgctc
gcaccggtgatcgcggccctcgacggccccgaatgggtcctgcacgccgccgatcaggat
cttccgtgcctacgggaactcggcttcgtgtgccgggacctgtacgacaccgaactcgcc
ggccggctgctcggcctcgcgaaggtgaacctggcggcgatggtcgccgagttcctcggg
ctggggctcgtcaagggccacggggccgcggactggtcacgcagaccgttgcccgacgac
tggctcaactacgccgccctcgacgtcgaggtgctggtcgagttgcgcgacgcgatggac
gcggcgctcgtcgaggcaggcaaggacgggtgggcgcgccaggagttccgcgcggtcctc
gaccggccggccccggcgccgcgcgccgaccgctggcgcaagacgtcgaacatccacacc
gtcaagagcgcccgcaccctcgccgcggtgcgtgaattatggacggcccgtgaggaactc
gcacagaagcgagacgtggcgcccggccgcatcctgccggactcggcgatcgtcacggcc
gccacggcggacccgacgtcaccgcccgagctcacccggctccccgtgttcggcgggccc
cggcagcgacggcaggccggcatctggctcgccgcgctccagcgggcccgggacctgccc
gacgatcagctgccggcacgcaaggcacccacggtcgggctgcccccggtcaaccggtgg
gatcagcgcaatcccgaggccgcggagcgtgccgcgaaggtccggccggtggtccgggag
atcgccgagaccctgcagttgccggtggagaacctgctggcccccgacacggtgcgccaa
ctctgctgggacggcatcgacctcccggcgaccgtggagtccgtggaccggcggctggcc
gccgacggagcccgggagtggcagcgaggcctgaccgccggcccgatcgcggatgcactc
aacagcgtgtccgactcgacggactga
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