Gordonia insulae: D7316_01005
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Entry
D7316_01005 CDS
T05722
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
gom
Gordonia insulae
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gom03051
]
D7316_01005 (pafA)
Enzymes [BR:
gom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
D7316_01005 (pafA)
Proteasome [BR:
gom03051
]
Prokaryotic proteasome
Bacterial regulatory particles
D7316_01005 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AZG44420
UniProt:
A0A3G8JJN0
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All DBs
Position
1076608..1077951
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGSHPEYA
TAECDSLIQLINHDRAGELVLEDLLIDAEQRLADEGIGGDIYLFKNNTDSAGNSYGCHEN
YLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSEMTTMLKVGSAALVLEMIEAGVAFRDFAL
DNPIRAIREVSHDPTGRRPVRLAGGRQASALDIQREYHARAVEHMTNRRPDPEMDKVVDL
WGRMLDAVESTDFSTVDTEVDWVIKRKLFQRYQDRYSMDLSDPKIAQLDLAFHDIKRGRG
VFDVLTRKGLVTRATTDEAIATAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgagacggaattcggtgtcacatgtacctttcacggccatcgtcgactgagt
cctgacgaggtcgcccggtacctgttccgccgggtcgtctcctggggtcgttcgtccaac
gtgttcctgcagaacggtgcccggctctacctcgacgtcgggtcgcatccggagtacgcg
acagcagagtgtgacagcctcatccagctgatcaatcatgatcgggcgggggagctggtc
ctcgaggatctcctcatcgacgccgagcagcggctcgcggacgaggggatcggcggagac
atctacctgttcaagaacaacaccgattcggcaggcaactcctatggctgccacgagaac
tacctggtggttcgcgcgggcgagttctcccggatctccgacgtcctgctgccgttcctg
gtgacccggcagctgatctgcggcgcaggcaaggttctgcagacacccaaggcggccacc
ttctgcctctcgcagcgtgccgaacacatctgggagggcgtgtcgtcggcgaccaccagg
tcgcgcccgatcatcaacacccgcgatgagccgcacgccgacgcggagaagtaccgcagg
ctccacgtcatcgtgggcgattccaacatgtccgagatgaccacgatgctcaaggtcggg
tcggccgcgctcgtgctcgagatgatcgaggccggcgtcgcgttccgcgacttcgcgctc
gacaacccgatccgcgccatccgcgaggtcagtcacgacccgaccggccgtcgccccgtc
cggctcgccggtgggcgccaggccagcgccctcgacatccagcgcgagtatcacgcacgg
gcggtcgagcacatgaccaatcggcggccggatcctgagatggacaaggtcgtcgacctg
tggggccggatgctcgacgcggtcgagagcaccgacttctccaccgtcgacaccgaggtc
gactgggtgatcaagcgcaagctgttccagcgctaccaggaccgctactcgatggacctg
tcggaccccaagatcgcccagctcgatctggcgttccatgacatcaaacgcgggcgtggt
gtcttcgacgtgctcacccgcaaggggctcgtcacccgggccaccaccgacgaggcgatc
gccaccgcggtcaacgaaccgccacagaccacgcgggccaagctgcggggcgacttcatc
tccgcagcacagaaagccggccgcgacttcaccgtcgactgggtccatctgaaactcaac
gatcaggcgcagcggaccgtgctctgcaaggacccgttccgcagcgtcgacgagcgcgtc
gatcgtctgatcgcatccatgtga
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