Gordonia insulae: D7316_01089
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Entry
D7316_01089 CDS
T05722
Symbol
phrB
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
gom
Gordonia insulae
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_01089 (phrB)
Enzymes [BR:
gom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
D7316_01089 (phrB)
DNA repair and recombination proteins [BR:
gom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
D7316_01089 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AZG44503
UniProt:
A0A3G8JHM6
LinkDB
All DBs
Position
complement(1165516..1167012)
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AA seq
498 aa
AA seq
DB search
MKVNPTASPEPLWIFGDQLGRHVHASADHADREVVLIESRSAFARKGGHRQKAHLLLSGM
RHLADELGDRVQYWQADGYRDALTTLGRPVVVHEPSSRAASRFVHRLADEGLVAEVLPNP
SFALSRSDFATWAGDADSFRLEAFYREQRRRFSVLMDGREPSGGKWNFDHENRDPPPKRS
TLGIEHPWWPTEDEIDAQVRADLDAMDAMFVGEDGPRLFAVTHDEARSALRTFIDHRLAT
FGRWEDAIMSDDWTMSHSLLSVPLNLSLLHPLEVVHAAEEAVRANRVGIAAAEGFIRQIL
GWREFVWHLYWHFGADYTAQNELGAHAPLPDWFRDLDAEAVTARCLSETLAGVRDRGWVH
HIPRLMVLGSHALQRGYDPAALTEWFRASFVDGFDWVMPVNVIGMSQHADGGLMATKPYT
SGGAYISTMSDLCRDCEYDPKKRVGDDACPFTAGYWWFTHRHQDMLGSNHRTARAVSSMR
RLTDLEALVEQEEHREAF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaacccgacggcatctcccgagccgctgtggatcttcggcgatcaactgggt
cggcatgtccacgcctcggctgaccacgccgaccgtgaggtcgtgctcatcgagtccagg
tcggcgttcgcacgcaagggtggtcatcgtcagaaggcacatctacttctctcgggcatg
cggcatctggcggacgaactcggtgaccgggtgcagtactggcaggccgacggctatcgg
gacgcactgaccacgctcggccggccggtcgtggtccacgaaccatcgtcgcgggcggca
tcgcggttcgtgcatcgtctcgccgacgaagggctggtcgccgaggtgctgccgaatccg
tccttcgcactgtcgcgcagtgacttcgccacgtgggccggggacgccgattcctttcgg
ctggaggcgttctatcgcgaacagcgccgccgtttctcggtgctgatggacggtcgggag
ccgtcgggtgggaagtggaacttcgaccacgagaacagggacccgcccccgaagcggtcg
acgctggggatcgagcacccgtggtggccgaccgaggacgagatcgatgcgcaggtacgc
gcggatctcgacgcgatggacgcgatgttcgtgggcgaggacgggcctcgtctgttcgcg
gtgacccatgacgaggcccgatccgcattgcggacgttcatcgatcatcggctcgcgaca
ttcggtcgatgggaagacgcgatcatgagcgacgactggacgatgtcgcactcgctgctg
tcggtgcccctcaatctctcgctgctgcatccgctggaagtggtgcatgcggcggaggaa
gctgtgagggcgaatcgcgtcggcatcgcggcggcggagggattcatccgccagatactc
ggctggcgcgagttcgtctggcacctctattggcatttcggcgcagactacaccgcacag
aacgaactcggcgcccacgctccgctccccgactggttccgagatctggatgccgaggcg
gtgacagcgcgctgcctgtcggagacactcgcgggcgtccgcgaccgcgggtgggtgcat
cacatcccgcgcctgatggtgctgggctctcacgcgctgcagcggggttacgacccggcc
gcactgaccgagtggtttcgggcgagcttcgtcgacggcttcgactgggtgatgccggtg
aatgtcatcgggatgagccagcatgcggacggcggactgatggcaaccaagccctacacc
tccggcggcgcgtacatctccacgatgtccgacctctgccgggactgcgagtacgacccg
aagaagcgtgtcggcgacgacgcgtgtccgttcaccgcgggctactggtggttcacccac
cgccaccaggacatgctcggttccaatcaccgcacggcgcgagcggtgtcatcgatgcgc
cggctgacggacctcgaggccctcgtggaacaggaggagcatcgcgaggcgttctga
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