Gordonia insulae: D7316_01353
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Entry
D7316_01353 CDS
T05722
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gom
Gordonia insulae
Pathway
gom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7316_01353 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gom03021
]
D7316_01353 (rho)
03019 Messenger RNA biogenesis [BR:
gom03019
]
D7316_01353 (rho)
Transcription machinery [BR:
gom03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
D7316_01353 (rho)
Messenger RNA biogenesis [BR:
gom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D7316_01353 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
AZG44763
UniProt:
A0A3G8JID2
LinkDB
All DBs
Position
complement(1455684..1457744)
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AA seq
686 aa
AA seq
DB search
MTDTDLISAPATTEAPAGGRSTRARTGLAGMVLTELRALAGELGIKGTSGMRKGDLIAAI
KERQESTSGAAKKTDTNGQMSITDGDGSTETADAAPPARRRRATRAESTEAPTTAASTTE
ASTTTAPTTESPAEAASADTGSSSATGTAESQTTTKDSPAKDAPAESTDGGEQRGRNRNR
NQNRDGGQGRDNQGRDGGQGRDNQGRDNQGRDGGQGRDNQNRDNQNRDNQGRDNQGGQNR
DNQNRRDNQNNQGGGQNNRNNRDNRDDDDDDGSGRGRRGRRFRERRRGRDRESTGQNEPQ
VSDDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAITGAVKVP
REGEQPNQRQKFNPLVRLDTVNGTDIETAKRRPEFSKLTPLYPNQRLRLETTPERLDTRV
IDLIMPIGKGQRALIVSPPKAGKTTILQDIANAIATNNPECHLMVVLVDERPEEVTDMQR
SVKGEVIASTFDRPPSDHTSVSELAIERAKRLVENGKDVVVLLDSITRLGRAYNNASPAS
GRILSGGVDSTALYPPKRFLGAARNIEHGGSLTIIASALVETGSTGDTVIFEEFKGTGNA
ELKLDRKISERRVFPAVDVNLSSTRKDELLLSPEEFQIVHKLRRVLSGLDSQQAIDLLIS
QLKKTKTNIEFLMQVQKTAPGAMRDD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
ttgacggatacggacctcatctccgcaccggccaccacagaggcacccgccggtgggcgg
tcaacccgtgcccgtaccgggctcgccgggatggtgctcaccgaactgcgcgcgctcgca
ggtgagctgggcatcaagggaacgtcgggaatgcgcaagggcgacctgatcgccgccatc
aaggagcggcaggaaagcacgtccggcgccgcgaagaagaccgataccaacggccagatg
tcgatcaccgacggcgacggctcgaccgagaccgccgacgcggcaccgccggcccggcgc
cgccgcgccacgcgggccgaatcgaccgaggcccccaccacagcggcctccaccaccgag
gcctccaccaccacggctcccaccacggagagccccgccgaggccgccagcgcggacacc
ggcagttcgtcggcgaccggcaccgccgagtcgcagaccaccaccaaggattcgcccgcg
aaggacgctcccgccgagtccaccgacggcggtgagcagcgtggccgcaaccgcaatcgc
aaccagaaccgcgatggcggtcagggccgtgacaaccagggccgtgacggcggtcagggt
cgtgacaaccagggtcgtgacaaccagggccgtgacggtggtcagggtcgcgacaaccag
aatcgcgacaaccagaatcgtgacaaccagggccgcgacaaccagggtggccagaaccgc
gacaaccagaaccgccgcgacaaccagaacaaccagggtggcggccagaacaaccgcaac
aaccgggacaaccgcgacgacgacgatgacgacggcagcggccgcggccgccgtggacgt
cgcttccgcgaacggcgtcgtgggcgcgaccgcgagtcgaccggccagaacgagccgcag
gtctccgacgacgacgtggtgcagccggtcgccgggatcctcgacgtcctcgacaactac
gcgttcgtccgcacctccgggtacctcgccgggccgaacgacgtctacgtctcgatgaac
atggtccgcaagaacggcctccgccgcggtgacgcgatcaccggtgcggtgaaggtcccg
cgtgagggcgagcagcccaaccagcggcagaagttcaacccgctcgtgcggctcgacacc
gtcaacggaaccgacatcgagaccgccaagcggcgtcccgagttcagcaagctgaccccg
ctgtatccgaatcagcgtctgcgtctcgagaccacgccggagcggttggacacccgcgtg
atcgacctgatcatgccgatcggcaagggtcagcgtgccctgatcgtctcgccgccgaag
gccggtaagaccacgatcctgcaggatatcgccaacgcgatcgccaccaacaacccggaa
tgccacctcatggtcgtgctcgtcgacgagcgccccgaggaggtcaccgacatgcagcgt
tcggtgaagggcgaggtcattgcgtcgaccttcgatcgtccgccgtcagatcacacctcg
gtgtccgagttggcgatcgagcgcgcgaagcgactggtggagaacggcaaggacgtcgtg
gtgctgctcgactcgatcacccgactcgggcgtgcgtacaacaacgcgtcgccggcctcg
ggccgaatcctgtccggtggtgtcgattccacggcgctctacccaccgaagcgtttcctg
ggtgcagcccgcaacatcgagcacggcggctcgctcacgatcatcgcctccgcgctggtc
gagaccggctccaccggtgacacggtcatcttcgaggagttcaagggcaccggcaacgcc
gagctcaagctggatcggaagatctcggagcgccgcgtgttccccgcggtcgacgtgaat
ctctccagtacccgcaaggacgaattgctgctgtcgccagaggaattccagatcgtgcac
aagctgcggcgtgtgctgtccgggctggattcccagcaggccatcgatctgctgatcagc
cagctgaagaagacgaagaccaacatcgagttcctgatgcaggtccagaagaccgcgccg
ggagcgatgcgggacgactag
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