Gordonia insulae: D7316_01365
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Entry
D7316_01365 CDS
T05722
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gom
Gordonia insulae
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_01365 (sbcD)
DNA repair and recombination proteins [BR:
gom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D7316_01365 (sbcD)
Archaeal homologous recombinant proteins
D7316_01365 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AZG44774
UniProt:
A0A3G8JIB2
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All DBs
Position
complement(1471106..1472311)
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AA seq
401 aa
AA seq
DB search
MRVLHTSDWHLGRTFHGVELLDDQRRALAHLAGIVADEAVDVVVVAGDVYDRSVPPADAV
RVYDDGLAAIAAAGARIVITSGNHDSPTRLGAGSSFAAAGGLHLRTTVADLDRPVSLSDE
FGEVLIYGIPYLEPDSVRTELGVDAARGHAAVLGAAMDRVRADLGDRVARGHAVRSLVAA
HAFVVGGVAAGSERSISVGGVETVSAATFAGVDYVALGHLHSPQRLTETVRYSGSLLPYS
FGERTHRKSVSIVDLGADGVTEVRAVELPTVRGLSSLTGTLDDLLADDSFAHAEEDYIEA
TLTDVTRPIDAMRRLRERFPYAVHVQWDRPHVGDRLDYRSRVAGRNDADIIASFVADVRD
DPTAGERRLVEAALRAVVGEPEADGSGEWMLFDVGSLADSA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttgcacacctccgactggcatctgggacggacgttccacggggtcgagttg
ctcgacgaccagcggcgggcactggcgcacctcgccgggatcgtcgccgacgaggcggtc
gatgtggtcgtggtggccggtgacgtctacgaccgatcggtgccaccagccgatgcggtg
cgtgtctatgacgacgggctcgcggcgatcgcggcggcgggcgcccggatcgtcatcacc
tccggcaaccacgattcgccgaccaggctcggtgccggatcgtcgttcgcggcggccggt
ggtctgcacctgcggaccaccgtcgccgacctcgaccgcccggtgtcgctgtccgacgag
ttcggcgaggtcctgatctacggcatcccctacctcgaacccgactcggtcagaaccgaa
ctcggtgtcgatgcggcccgcggccacgccgcggtgctcggcgccgcgatggatcgtgtg
cgagccgatctcggcgatcgggtcgcccggggccacgcggtccgctccctggtggccgca
cacgcgttcgtcgtcggcggcgtcgccgccggctccgaacgctcgatcagcgtcggtggc
gtcgaaaccgtctcggccgcgaccttcgcgggtgtggactatgtggcattggggcatctg
cactcgccgcaacggctcaccgagacggttcggtacagcggctcactgctgccgtactcg
ttcggcgaacgcacgcaccgcaagtcggtgtcgatcgtcgatctcggtgccgacggcgtg
accgaggtccgtgcggtggagctgccgaccgtccgtggattatcttctctcaccggcact
ctcgacgatctgctggcagacgactccttcgcgcacgcggaggaggattacatcgaggcg
accttgaccgacgtgacgcggccgatcgatgcgatgcgtcggctacgcgagcggttcccg
tacgcggtgcacgtccagtgggatcgaccccacgtcggtgaccggctggactatcgttcc
cgggtggccgggcggaacgacgccgacatcatcgcgtcgttcgtcgccgacgtccgcgat
gacccgacggcgggggagcgtcgcctcgtggaggcggcgttgcgcgcggtcgtcggcgag
ccggaagccgatggcagtggggaatggatgttgttcgacgtcggctcgctcgcggattcg
gcatga
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