Gordonia insulae: D7316_01876
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Entry
D7316_01876 CDS
T05722
Symbol
uvrD1_1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gom
Gordonia insulae
Pathway
gom03420
Nucleotide excision repair
gom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D7316_01876 (uvrD1_1)
03430 Mismatch repair
D7316_01876 (uvrD1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_01876 (uvrD1_1)
Enzymes [BR:
gom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7316_01876 (uvrD1_1)
DNA repair and recombination proteins [BR:
gom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7316_01876 (uvrD1_1)
MMR (mismatch excision repair)
Other MMR factors
D7316_01876 (uvrD1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
PcrA_UvrD_tudor
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AZG45281
UniProt:
A0A3G8JJL4
LinkDB
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Position
complement(2040024..2042528)
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AA seq
834 aa
AA seq
DB search
MTSSTRETAPTSPESGIGTAPEDRTARLLDGLNPPQRAAVLHAGAPLLIVAGAGSGKTAV
LTRRIAYLLAERDTTPGQILAITFTNKAAAEMRERVIELVGPRANFMWVSTFHSTCVRIL
RAQSALLGPRNSNFSIYDSDDSKRLLGMIIRDLELDPKKYSPRGVAVSISNLKNELISPE
DALATATDGEPSVLVIAQIFAEYQRRLRAANAFDFDDLIGETVALLQRHPEVAEYYRRRF
RHVMVDEYQDTNHAQYVFIRELVGDADTESPVPPSELCVVGDADQSIYAFRGATIRNIEE
FERDFPNAETILLEQNYRSTQTILSAANAVISRNENRRDKRLWTDSGDGELIVGYVADSD
REESLFIAKEIESLTDYSIGGSSSHSYSDIAVFYRTNTGSRSVEEVFVRHGIPYKVVGGT
KFYERKEVRDIVAYLRVVANPDDAVSLRRILNTPRRGIGDRAEACVAVHSENRGISFYEA
LVEGAEGKVALLNTRAVKQIGGFVELIEGLRNDFLATFGAAGEAGEDVAVVDATEEGADI
GELVDAIVERTGYRAELEASRDPQDGARLDNINELVAVAREFSAEAAGLASGEPDDFDDL
DDADEIPANDGEPEPGSLASFLEKVSLVADADQLPDEGEGVVTLMTLHTAKGLEFPVVFV
TGWEDGHFPHMRALGDPAELSEERRLAYVGITRAKERLYVTRSITRASWGQPVSNPESRF
LQEIPQHLVDWRRTEPRRSMSRHLGSSGGVFGRGDSGFGGGGRGRSSYSTDPTRGRNKQV
NYDIGDRINHPKYGLGKAVAKEGSGATERITFEFGGNVGRVTLLTAGGLPGDKL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctccacccgcgagacggcccccacctccccggaatccggtatcggcaccgcg
cccgaggaccgcaccgcccgtctcctcgacgggctgaacccgccccaacgcgcggcggtc
ctgcatgccggtgctccgctgctgatcgtcgcgggcgcgggttcgggcaagaccgcggtg
ctcacccggcgcatcgcctatctgctcgccgagcgcgacaccactcccggtcagatcctg
gcgatcaccttcaccaacaaggccgccgcggagatgcgggaacgggtcatcgaactcgtg
ggtccgcgggccaacttcatgtgggtatcgaccttccactcgacgtgtgtccgcatcctg
cgtgcccagtcggcgctgctcggaccgcgcaactcgaatttctccatctacgactccgat
gactcgaagcgcctgctgggcatgatcatccgagatctggagctcgaccccaagaagtac
agcccgcgtggtgtcgcggtcagcatctccaacctcaagaacgaactgatcagcccggag
gacgcgttggcgaccgcgacggacggggaaccgtcggtgctggtgatcgcccagatcttc
gcggagtatcagcgtcgcctgcgggcggccaacgcgttcgacttcgacgacctcatcggc
gagaccgtggcgttgctgcagcgtcatcccgaggtcgccgaatactaccgtcgccggttc
cgccacgtcatggtcgacgagtaccaggacaccaaccacgcccagtacgtcttcatccgg
gaactcgtcggcgacgcggacaccgagtcgccggtgccgccgtcggaattgtgcgtggtc
ggcgacgccgaccagtcgatctatgccttccgcggggcgacgatccgcaacatcgaggaa
ttcgagcgagacttcccgaacgccgagaccatcctcctcgagcagaactatcggtccacg
cagacgatcctgtccgcggcgaacgcggtcatctcccgcaacgagaaccggcgggacaag
cgactgtggacggactcgggtgacggtgaactgatcgtcgggtacgtggccgattccgac
cgcgaggaatcgctgttcatcgccaaggagatcgagtcgctgaccgactactcgatcggc
gggtcgtcgagccactcctactccgacatcgcggtgttctaccgcaccaacaccggctcc
cgatcggtcgaggaggtgttcgtccggcacggcatcccctacaaggtcgtcggcgggacg
aagttctacgagcgcaaggaggttcgcgacatcgtcgcctatctccgggtggtcgcgaac
ccggacgacgcggtgagtctgcgacgcatcctgaacactccgcggcgtggcatcggagat
cgtgccgaggcgtgcgtcgcggtgcattcggagaatcgtgggatcagcttctacgaggcg
ctggtcgagggtgccgaaggcaaggtggcgctgctgaacacgcgcgccgtgaagcagatc
ggcggattcgtcgagctgatcgagggtctgcgcaacgatttcctggccaccttcggcgcg
gccggggaggcgggtgaggatgttgccgtcgtcgacgccaccgaggagggtgccgacatc
ggcgagttggtggacgccatcgtcgagcgcaccgggtatcgggcggagctcgaggcgtcg
cgcgatccccaggatggcgcccgcctcgacaacatcaacgaactggtcgcggtcgcaagg
gaattcagtgcggaggcagccggcctcgcgagcggcgagccggatgatttcgacgatctg
gacgatgccgatgagatcccggcgaacgacggcgaacccgaacccggatcgctggcctcg
ttcctggagaaggtgtcgctggtcgccgatgccgaccagctgcccgacgagggcgagggt
gtggtcacgttgatgaccctgcacaccgccaaggggctcgagttccccgtggtgttcgtg
accggctgggaggacgggcatttcccgcacatgcgcgcgttgggtgaccccgccgagctg
agcgaggagcgtcgactcgcctacgtcggcatcacgcgggccaaggagcgtctgtatgtg
acccggtcgatcacccgcgcatcgtggggtcagccggtctcgaacccggaatcgcgtttc
ctgcaagagattccgcaacatctggtcgattggcgtcgtaccgaaccccggcggtcgatg
agtcggcatctcggatcgtcgggtggcgtgttcggtcgcggtgattcgggcttcggtggg
ggaggccgcggacggtcctcgtactcgacggacccgacgcgcgggcgcaacaagcaggtg
aactacgacatcggggatcgcatcaaccacccgaagtacggtctcggcaaggccgtggcc
aaggagggcagtggtgcgaccgagcgcatcaccttcgagttcgggggcaacgtcggacgg
gtcacgctactgacggccggcggtctgcccggcgacaagctgtag
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