Gordonia insulae: D7316_01890
Help
Entry
D7316_01890 CDS
T05722
Symbol
fpg2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gom
Gordonia insulae
Pathway
gom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D7316_01890 (fpg2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_01890 (fpg2)
Enzymes [BR:
gom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D7316_01890 (fpg2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D7316_01890 (fpg2)
DNA repair and recombination proteins [BR:
gom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D7316_01890 (fpg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AZG45295
UniProt:
A0A3G8JKX8
LinkDB
All DBs
Position
complement(2057265..2058134)
Genome browser
AA seq
289 aa
AA seq
DB search
MAAIADYVDGRAAGFPIRRVDVASLAVLKTADPPYTALVGRVIESVGRIGKYLVIRTVPG
PDSTADPVISLVIHLSRAGWLRWSEQLSQTPPRPGGKGPIAIRVHCGLPGEGFDVTEAGT
QKRLAVWVVRDVGDVDRIASLGPDVLACTREEFGAILAGTTSRIKNVLTDQRTIAGVGNA
YSDEILHTARMSPFASAGSLTDAQVDTLYDAVHSVLADAIVRLEGQTVARLKSEKRTGLQ
VHARTGLPCPVCGDTIREVSFSDRSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgatcgcggattatgtcgacggtcgagccgccggattcccgatccgtcgggtc
gacgtggcgtcgttggcggtgctcaagaccgcggatccgccgtacacggcgctggtcggc
cgggtgatcgagtcggtcggccggatcgggaagtacctggtgatccgcaccgtgccgggc
cccgactccaccgccgacccggtgatcagcctggtgatccacctgtcccgcgcggggtgg
ctgcggtggagcgagcagctctcgcagaccccgccgcgacccggtggcaaggggccgatc
gccatccgggtgcactgcggtctgcccggtgagggcttcgacgtcaccgaggcaggtaca
cagaagcgactggcggtctgggtggtccgcgacgtcggcgacgtcgaccgtatcgcgtca
ctcggccccgatgtgttggcgtgcacgcgcgaggagttcggtgcgatcctggccggcacc
acgagtcggatcaagaatgtcctgaccgaccagcggaccatcgccggtgtcgggaacgcc
tactccgacgagatcctgcacaccgcgcggatgtcgccgttcgcctccgccggatcactc
accgacgcgcaggtggacacgctctacgacgcggtgcactcggtcctcgccgatgcgatc
gttcgcctcgagggccagacggtggcccgattgaagtcggagaagcgcaccggcctgcag
gtgcatgcgcgcaccggtctgccgtgtcccgtctgcggggacaccatccgggaggtgtcg
ttctcggatcggtcctttcagtactgcccgacctgtcagaccggtgggaaggtattggcc
gaccgccggatgtcgcgattgctgaagtga
DBGET
integrated database retrieval system
