Gordonia insulae: D7316_03012
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Entry
D7316_03012 CDS
T05722
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
gom
Gordonia insulae
Pathway
gom03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
D7316_03012 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_03012 (ku)
DNA repair and recombination proteins [BR:
gom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
D7316_03012 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
AZG46411
UniProt:
A0A3G8JMU4
LinkDB
All DBs
Position
complement(3264811..3265752)
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AA seq
313 aa
AA seq
DB search
MNSMRSIWKGDLSFGLVNVPVKVYSATESHDRKSYQVDSKDGTRIRYRRVREGTDTEVDY
SDIANAYETDAGETVILTKEDLATLPVQKSPEISILEFVPTEQVDPIYFDKPYYLEPASK
SPKAYALLAKALEETDRLAIANFTLRNRTRLAALRVVDGVMTLQTLLWPDEVRKADFDFL
DDAPEIRKQELDMASSLIETMAKDFDPTEFEDTYQNELSKLVEAKADGAEAFPESDEEPE
ADEDSEVADLLAALRASVKDKPSSGGSSSKSDDDEKEPAKKAPAKKAAAKKAPAKKAAAK
KAPAKKAAAKKSA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaactccatgcgctcgatttggaagggcgatctgagctttggcctggtgaacgtgccc
gtcaaggtgtactcggcgacggaaagtcacgaccgcaagtcgtatcaggtcgactccaag
gacggcacgcgcatccgctaccgccgggtccgtgagggaaccgacaccgaggtcgactac
tcggacatcgccaacgcgtacgagacggatgcgggcgagacggtgatcctcaccaaggag
gacctcgcgacgctgccggtgcagaagagcccggagatctcgatcctggagttcgtgccc
accgagcaggtcgacccgatctacttcgacaagccctactacctcgagcccgcgtcgaag
tcgcccaaggcgtatgcactgttggccaaggcgctcgaggagacggaccgtctggcgatc
gccaacttcaccctgcgcaaccggacgcggctggccgcattgcgggtcgtcgacggtgtc
atgaccttgcagacgctgttgtggcccgacgaggtccgcaaggccgacttcgacttcctc
gacgatgccccggagatccgcaagcaggaactcgacatggcgtcgtccctgatcgagacg
atggccaaggacttcgatccgaccgagttcgaggacacctatcagaacgagctgtccaaa
ctcgtcgaggccaaagccgatggcgccgaggcattcccggagagcgacgaggaaccggaa
gccgacgaggactccgaggtggccgatctgctcgccgcgctgcgggcgtcggtgaaggac
aaaccgtcgtcgggtgggtcgtcgtcgaagagcgacgacgacgagaaggagccggcgaag
aaggctcccgcaaagaaggcggcggccaagaaggcccccgcgaagaaagccgcggccaag
aaggcgccggcgaagaaggccgcagcgaagaagtcggcgtag
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