Gordonia insulae: D7316_03117
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Entry
D7316_03117 CDS
T05722
Symbol
lcfB_13
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gom
Gordonia insulae
Pathway
gom00061
Fatty acid biosynthesis
gom00071
Fatty acid degradation
gom01100
Metabolic pathways
gom01212
Fatty acid metabolism
gom02024
Quorum sensing
gom04146
Peroxisome
Module
gom_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D7316_03117 (lcfB_13)
00071 Fatty acid degradation
D7316_03117 (lcfB_13)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D7316_03117 (lcfB_13)
09145 Cellular community - prokaryotes
02024 Quorum sensing
D7316_03117 (lcfB_13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gom01004
]
D7316_03117 (lcfB_13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gom04147
]
D7316_03117 (lcfB_13)
Enzymes [BR:
gom01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D7316_03117 (lcfB_13)
Lipid biosynthesis proteins [BR:
gom01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D7316_03117 (lcfB_13)
Exosome [BR:
gom04147
]
Exosomal proteins
Exosomal proteins of breast milk
D7316_03117 (lcfB_13)
Exosomal proteins of breast cancer cells
D7316_03117 (lcfB_13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AZG46516
UniProt:
A0A3G8JN60
LinkDB
All DBs
Position
complement(3376850..3378502)
Genome browser
AA seq
550 aa
AA seq
DB search
MSAYDDRPWLAHYGGRPAHQRVEFGTAMDMFDAAVAAAPEDPAIHYFDATLTWAELDHAS
DAVAALLIARGFRAGDRIALCVQNDPAFVVGLVAGWKVGGVPTAMSPMSKADEVVWFLRQ
HTPTALLALDDLYEDVVRDILASETDIAVPIVVTSSSLDWQTRDDPRAFAGTTRRRPPDT
IDLVSLVGAHRGMPGRRPVGPGDVAVLLGTSGTTGFPKSAQISHANLTFNTQTYRDWTGL
SPGEPVLALAPIFHVTGLVGAVTLGMLLRSAVVLTHRIHPGVVAAAIRERSPAFSVAAIT
AYLGLADESDTTPTEMRPLRLRYSGGAPIEPVVADRLEEALGGYVYNIYGQTETTSPSHI
VPPGLRAPVDAETGVLSVGIPVSDTVVRVVDDDGGDLPVGAIGELITSGPQVIPGYWNDP
EATATALSGGELRTGDIGFMDADGWFYVVDRSKDVINASGYKIWPHEVELILMRHPDVEE
AAVVGIPDDYRGESAKAYVVLRTDGAVTEPELVAYCRARMAAYKYPREVELVASLPRSAT
GKLLRRKLRG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcctacgacgaccgcccctggctggcgcactacggcggtcggccggcgcatcag
cgcgtggagttcggcacggcgatggacatgttcgacgcagcggtggcagcggcaccggag
gatcccgcgatccactatttcgatgcgactctcacgtgggccgagctcgatcatgcatcg
gatgccgtcgccgccctgctgatcgcccgagggttccgggccggggaccggatcgccctg
tgcgtgcagaacgacccggccttcgtcgtgggactcgtggcggggtggaaggtcggggga
gtgcccaccgcgatgagtccgatgagcaaggccgacgaggtggtctggttcctgcggcag
cacaccccgacggcgttgctcgcgctcgacgacctgtacgaggatgtcgtccgcgacatc
ttggcgtccgaaaccgatatcgcggtgccgatcgtggtcacgtcatcgtctctcgactgg
cagacccgcgacgaccctcgcgccttcgccgggacgacccggcggcgcccacccgacacc
atcgatctcgtgtcgctggtgggtgcccatcggggcatgccggggcgccggcccgtcggc
cccggcgatgtcgccgtgctgttggggacgtccggtaccaccggattcccgaagagcgcg
cagatcagtcacgcgaacctgaccttcaacacccagacgtatcgtgattggaccgggttg
agcccgggcgagcccgtcctcgcgctcgccccgatctttcacgtgaccggcctcgtcggt
gcggtgaccctcggcatgctgctgcggtcggcggtcgtgctcacacaccggattcatccg
ggcgtggtggccgctgcgatccgggaacggtcgccggcgttctccgtcgccgccatcacc
gcctacctcgggctcgccgacgaatcggacaccaccccgacggagatgcgaccgttacgg
ctccggtactcgggtggggcgccgatcgaacccgttgtggcggacagactcgaggaagcg
ctcggcggctatgtgtacaacatctacggccagaccgagacgacgtcgccatcgcacatc
gtgccgcccgggttgcgtgcgcccgtcgatgccgagaccggtgtcctgtccgtggggatt
ccggtgtccgacacggtggtccgtgtggtcgacgacgacgggggtgacctgcccgtcggg
gcgataggcgagttgatcaccagcggtccccaggtcatccccggctactggaacgatccg
gaggcgacggccacggcgctgtccggcggcgaactccgcacgggcgatatcggattcatg
gatgccgacggctggttctacgtcgtcgaccgcagcaaggacgtgatcaacgcgtccggg
tacaagatctggccccacgaggtggagctgatcctcatgcgtcaccccgatgtggaggag
gcggccgtggtgggcattccggacgactatcgcggcgaatcggccaaggcctacgtggtg
ttgcgtaccgacggtgccgtgaccgaacccgaactggtcgcgtactgccgtgccaggatg
gcggcgtacaagtacccgcgcgaggtggaactcgttgcctcgctaccgcggtcggcaacc
gggaagctgttgcggcgcaagcttcgagggtga
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