Gordonia insulae: D7316_04087
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Entry
D7316_04087 CDS
T05722
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gom
Gordonia insulae
Pathway
gom00521
Streptomycin biosynthesis
gom00523
Polyketide sugar unit biosynthesis
gom00525
Acarbose and validamycin biosynthesis
gom00541
Biosynthesis of various nucleotide sugars
gom01055
Biosynthesis of vancomycin group antibiotics
gom01100
Metabolic pathways
gom01110
Biosynthesis of secondary metabolites
gom01250
Biosynthesis of nucleotide sugars
Module
gom_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D7316_04087 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D7316_04087 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
D7316_04087 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D7316_04087 (rmlB)
00525 Acarbose and validamycin biosynthesis
D7316_04087 (rmlB)
Enzymes [BR:
gom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D7316_04087 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
adh_short
NmrA
B12D
Motif
Other DBs
NCBI-ProteinID:
AZG47476
UniProt:
A0A3G8JRF0
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Position
complement(4406985..4407989)
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AA seq
334 aa
AA seq
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MRVLVTGGAGFIGANFVLRTLSQRPDVQVTVLDKLTYAANPATLAPVAERIELVTGDIAD
AELVDGLVAGTDLVVHFAAESHNDNSLADPSAFVQTNLVGTYSLLEAVRRHDVRYHHIST
DEVYGDLDLDDPARFTEHTAYNPSSPYSSTKAGSDLLVRAWVRSFGIAATISNCSNNYGP
FQHIEKFIPRQITNVLTGVRPRLYGDGRNVRDWIHVDDHNDAVWTIIDRGQIGETYLIGA
DGEVDNRTVVETILDLLAQPTDAFDFVTDRPGHDRRYAIDSTRLRTELGWRPQYVDFRTG
LAATIAWYRDHPDWWQPNKHTVEAGYAATEKIIG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttctggtgaccggtggtgccgggttcatcggtgcgaacttcgtgttgcgcacg
ctgtcgcagcggcccgacgtgcaggtcacggtgctcgacaagctgacctatgcggccaac
ccggccacgctggcaccggtcgccgagcgcatcgaactggtcaccggcgacatcgccgac
gccgagctggtcgacgggctcgtggccggcaccgatctggtggtgcatttcgccgccgaa
tcccacaacgacaactcgctggccgatccgtcggcgttcgtgcagaccaacctggtcggc
acctacagtctgctcgaggcggtacgtcgccacgacgtgcgctatcaccacatcagcacc
gacgaggtctacggcgacctcgacctcgacgacccggcccgattcaccgagcacaccgcc
tacaacccgtcgagcccctacagctccaccaaggccggcagcgacctgctggtccgcgcc
tgggtccgctcgttcggcatcgctgccacgatctccaactgctccaacaactacgggccc
ttccaacacatcgagaagttcatcccccgccagatcaccaacgtgctcaccggggtacgg
ccccgtctctacggcgacggccgcaacgtgcgcgactggatccacgtcgacgaccacaac
gacgccgtctggaccatcatcgaccgcggccagatcggtgagacctacctgatcggcgcc
gacggtgaggtcgacaaccgcaccgtcgtggaaaccatcctggatctactcgcacaaccc
accgacgcgttcgacttcgtcaccgaccggcccggccacgaccgccgctacgccatcgac
tccacccggctacgcaccgaactcggttggcgcccacagtatgtggacttccgcaccgga
ctggccgccaccatcgcctggtaccgcgaccaccccgactggtggcaaccgaacaaacac
accgtcgaagcgggctacgcagccaccgagaagatcatcggctga
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