KEGG   Gordonia sp. NB41Y: Q9K23_01995
Entry
Q9K23_01995       CDS       T11308                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
gon  Gordonia sp. NB41Y
Brite
KEGG Orthology (KO) [BR:gon00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Q9K23_01995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gon03021]
    Q9K23_01995
Transcription machinery [BR:gon03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Q9K23_01995
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 HTH_20 DUF6033
Other DBs
NCBI-ProteinID: WLP91078
LinkDB
Position
478595..480043
AA seq 482 aa
MAATQTRQEGAEVDDSTSTTTTPAQKAPAKKAAKKAAAKKAPRKAAAKKAPAKRTAKKAA
AKKATSAKSGEGVDDGDLESTSIDDIDGPDADLDDDVEIDDLDVDDDDDAEDSADDDEED
EGDESSTPAAPAAAKKATAAATDKKGKDDAKSSGDFVWDEEESEALRQARKDAELTASAD
SVRAYLKQIGKVALLNAEEEVELAKRIEAGLFATERLRRILESGEKLTTTQKRDLNWISR
DGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTY
ATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDIT
PEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLET
LSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDY
LD
NT seq 1449 nt   +upstreamnt  +downstreamnt
gtggcagccacccaaacccgtcaggagggcgccgaggtagacgactcgacctcgacgacg
accaccccggcgcagaaggcacccgcgaagaaggccgccaagaaagcggcggccaagaag
gccccccgcaaggctgctgccaagaaggcacccgccaagcggaccgccaagaaggctgcg
gccaagaaggccacctcggccaagtccggcgagggggtcgacgacggcgatctcgagtcc
acctcgatcgacgacatcgacggtcccgacgccgacctcgacgacgacgtggagatcgat
gatctcgacgtcgacgatgacgacgacgccgaggactccgccgacgacgacgaggaggac
gagggcgacgagtcctcgacccccgcggctcccgcggccgccaagaaggccaccgccgcg
gccaccgacaagaagggcaaggacgacgccaagtcgtccggcgacttcgtctgggacgag
gaggagtcggaggccctgcggcaggcccgcaaggacgccgagctcaccgcctcggccgac
tcggtgcgcgcctacctcaagcagatcggcaaggtcgcgctgctcaacgcggaggaggag
gtcgagctcgccaagcggatcgaggccggcctgttcgccaccgagcggctgcgtcgcatc
ctggagtccggtgagaagctcaccaccacccagaagcgtgacctgaactggatctcgcgt
gacggcaaccgcgccaagaaccatctgctcgaggccaacctccgtctggtggtgtcgctg
gccaagcgctacaccggtcgcggtatggcgttcctggacctgatccaggagggcaacctc
ggtctgatccgtgcggtcgagaagttcgactacaccaagggctacaagttctccacctac
gccacgtggtggatccggcaggccatcacccgcgccatggccgaccaggcccgcaccatc
cgtatcccggtgcacatggtcgaggtgatcaacaagctcggccgtatccagcgtgagctg
ctccaggacctcggccgcgagccgaccccggaagagctcgccaaggagatggacatcacg
ccggagaaggtgctggagatccagcagtacgcgcgtgagccgatctcgctggaccagacc
atcggcgacgagggcgacagccagctcggtgacttcatcgaggactccgaggcggtcgtc
gccgtcgacgcggtgagcttcaccctgctgcaggatcagctgcagtcggtcctcgagacg
ctctccgagcgcgaggccggcgtggtgcgtctgcgcttcggtctcaccgacggtcagccg
cgcacgctcgacgagatcggccaggtctacggcgtcacccgtgagcgcatccgtcagatc
gagtcgaagacgatgtcgaagctgcgccacccgtcgcgctcccaggttctgcgcgactac
ctggactag

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