Gordonia sp. NB41Y: Q9K23_01995
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Entry
Q9K23_01995 CDS
T11308
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
gon Gordonia sp. NB41Y
Brite
KEGG Orthology (KO) [BR:
gon00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q9K23_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gon03021
]
Q9K23_01995
Transcription machinery [BR:
gon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q9K23_01995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
DUF6033
Motif
Other DBs
NCBI-ProteinID:
WLP91078
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Position
478595..480043
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AA seq
482 aa
AA seq
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MAATQTRQEGAEVDDSTSTTTTPAQKAPAKKAAKKAAAKKAPRKAAAKKAPAKRTAKKAA
AKKATSAKSGEGVDDGDLESTSIDDIDGPDADLDDDVEIDDLDVDDDDDAEDSADDDEED
EGDESSTPAAPAAAKKATAAATDKKGKDDAKSSGDFVWDEEESEALRQARKDAELTASAD
SVRAYLKQIGKVALLNAEEEVELAKRIEAGLFATERLRRILESGEKLTTTQKRDLNWISR
DGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTY
ATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDIT
PEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLET
LSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDY
LD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccacccaaacccgtcaggagggcgccgaggtagacgactcgacctcgacgacg
accaccccggcgcagaaggcacccgcgaagaaggccgccaagaaagcggcggccaagaag
gccccccgcaaggctgctgccaagaaggcacccgccaagcggaccgccaagaaggctgcg
gccaagaaggccacctcggccaagtccggcgagggggtcgacgacggcgatctcgagtcc
acctcgatcgacgacatcgacggtcccgacgccgacctcgacgacgacgtggagatcgat
gatctcgacgtcgacgatgacgacgacgccgaggactccgccgacgacgacgaggaggac
gagggcgacgagtcctcgacccccgcggctcccgcggccgccaagaaggccaccgccgcg
gccaccgacaagaagggcaaggacgacgccaagtcgtccggcgacttcgtctgggacgag
gaggagtcggaggccctgcggcaggcccgcaaggacgccgagctcaccgcctcggccgac
tcggtgcgcgcctacctcaagcagatcggcaaggtcgcgctgctcaacgcggaggaggag
gtcgagctcgccaagcggatcgaggccggcctgttcgccaccgagcggctgcgtcgcatc
ctggagtccggtgagaagctcaccaccacccagaagcgtgacctgaactggatctcgcgt
gacggcaaccgcgccaagaaccatctgctcgaggccaacctccgtctggtggtgtcgctg
gccaagcgctacaccggtcgcggtatggcgttcctggacctgatccaggagggcaacctc
ggtctgatccgtgcggtcgagaagttcgactacaccaagggctacaagttctccacctac
gccacgtggtggatccggcaggccatcacccgcgccatggccgaccaggcccgcaccatc
cgtatcccggtgcacatggtcgaggtgatcaacaagctcggccgtatccagcgtgagctg
ctccaggacctcggccgcgagccgaccccggaagagctcgccaaggagatggacatcacg
ccggagaaggtgctggagatccagcagtacgcgcgtgagccgatctcgctggaccagacc
atcggcgacgagggcgacagccagctcggtgacttcatcgaggactccgaggcggtcgtc
gccgtcgacgcggtgagcttcaccctgctgcaggatcagctgcagtcggtcctcgagacg
ctctccgagcgcgaggccggcgtggtgcgtctgcgcttcggtctcaccgacggtcagccg
cgcacgctcgacgagatcggccaggtctacggcgtcacccgtgagcgcatccgtcagatc
gagtcgaagacgatgtcgaagctgcgccacccgtcgcgctcccaggttctgcgcgactac
ctggactag
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