Gordonia sp. NB41Y: Q9K23_03545
Help
Entry
Q9K23_03545 CDS
T11308
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gon Gordonia sp. NB41Y
Pathway
gon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q9K23_03545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gon03019
]
Q9K23_03545
03009 Ribosome biogenesis [BR:
gon03009
]
Q9K23_03545
Enzymes [BR:
gon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q9K23_03545
Messenger RNA biogenesis [BR:
gon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q9K23_03545
Ribosome biogenesis [BR:
gon03009
]
Prokaryotic type
rRNA helicases
Q9K23_03545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
UvrA_inter
CMS1
HEM4
Cas3-like_C_2
ThylakoidFormat
adh_short
Motif
Other DBs
NCBI-ProteinID:
WLP91358
LinkDB
All DBs
Position
complement(836093..837859)
Genome browser
AA seq
588 aa
AA seq
DB search
MTGPTDAGDPSAITFDDLDIAPKVRSAITEVGYEKPSPIQAATIPPLMAGRDVVGLAQTG
TGKTAAFAIPILSRIDPSVRRPQALVLAPTRELALQVSEAFEKYSAHMPDVRILPIYGGQ
SYGVQLAGLRRGAQVIVGTPGRVIDHLDKGTLDISQLEYLVLDEADEMLTMGFAEDVERI
LSDTPESKQVALFSATMPSAIRRLAQRYLHDAEEITVKAKTATAQNISQRYLQVSHQRKL
DALTRFLEVETFDAMIVFVRTKQATEELAERLRARGFSAVAINGDMAQAQRERTINQLKD
GTIDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGNALLFVSPRE
RHLLRAIERATRQPLAEIGLPSAEDVNAQRVARFADSITENLASEHLDTFRKLVEDYAQD
KDVAMADIAAALALETRDGGFLMAPDPPEGHRAERRDRDRDRDRGPRKSGGSFATYRIAV
GRKHKVSPGAIVGAIANEGGLTRGDFGNISIRDDFSLVELPEDLDRNTLDLLRDTKIGKN
PIDLRRDMGAPRTRGGAKRSGGRDGGHQRGGGDWGKRGTRRVAGRGRG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacccacagacgcgggtgatccgtcggcgatcaccttcgacgatctcgacatc
gcacccaaggtgcgcagtgcgatcaccgaagtcggatacgagaagccgtcaccgatccag
gcggccacgattccgcccctgatggccggccgtgacgtcgtcggtctcgcccagacaggc
accggcaagaccgctgccttcgcgatcccgatcctgtctcggatcgacccctcggtgcga
cgcccgcaggccctggtgctcgcacccacccgcgagctcgccctacaggtgtcggaggcc
ttcgagaagtactccgcacacatgcccgacgtgcggatcctgccgatctacggtggccag
agctacggcgtgcagctcgccggactgcgccgcggtgcgcaggtcatcgtcggaacgccc
ggccgtgtgatcgatcacctcgacaagggcaccctcgacatctcgcagctggagtacctc
gtgctcgacgaggccgacgagatgctcaccatgggcttcgccgaggacgtcgaacgcatc
ctctccgacaccccggagagcaagcaggtcgccctgttctcggccaccatgccgtcggcg
atccgccggctcgcgcagcgttatctgcacgacgccgaggagatcacggtcaaggccaag
accgcgaccgcgcagaacatctcgcagcgctacctgcaggtgtcccaccagcgcaaactc
gacgcgctgacccggttcctcgaggtcgagacattcgacgcgatgatcgtgttcgtccgc
accaagcaggccaccgaggagctcgccgaacggctgcgtgcccgcggtttctccgcggtc
gcgatcaacggcgacatggcgcaggcccagcgtgagcggacgatcaaccagctcaaggac
ggcaccatcgacatcctggtcgccaccgacgtcgccgcgcgcggcctcgacgtcgaccgg
atctcgcacgtggtcaactacgacatcccgcacgacaccgagtcctacgtccaccggatc
ggccggaccggccgtgccggtcggtcgggcaatgcgctgctgttcgtgtccccgcgtgag
cgtcacctgctgcgtgcgatcgagcgggccacccgccagccgctcgccgagatcgggctg
ccgtcagccgaggacgtcaacgcccagcgcgtggcacggttcgccgactcgatcaccgag
aacctcgcctccgagcatctcgacaccttccgcaagctggtcgaggactacgcccaggac
aaggacgtggcgatggccgacatcgccgccgccctggccctggagacccgcgacggcggc
ttcctgatggcgccggatccgcccgaggggcaccgtgccgaacgccgcgaccgcgatcgt
gatcgtgaccgcgggccgcgcaagtccggcggcagcttcgccacctaccggatcgccgtc
ggccgcaaacacaaggtgtcgccgggtgccatcgtcggtgcgatcgccaacgagggcggc
ctgacccgcggtgatttcggcaacatcagcatccgcgacgacttctcgctggtggaactg
ccggaggatctcgaccgcaacaccctcgacctgctacgcgacaccaagatcggcaagaac
ccgatcgacctgcgtcgcgacatgggggcgccgcgcactcgcggtggtgccaagcgatcc
ggtggtcgcgacggtggccatcagcgtggtggcggcgactggggcaagcgggggacccgc
cgggtcgccggtcgcggacgcggctga
DBGET
integrated database retrieval system
