Gordonia sp. NB41Y: Q9K23_11195
Help
Entry
Q9K23_11195 CDS
T11308
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
Organism
gon Gordonia sp. NB41Y
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
Abhydrolase_1
Lipase_3
TRI4_N
Motif
Other DBs
NCBI-ProteinID:
WLP92737
LinkDB
All DBs
Position
complement(2589337..2594631)
Genome browser
AA seq
1764 aa
AA seq
DB search
MSELNSEQPEGVDPGASIANHAADGETAGGLTVPELQDWLRDWVSAATGVPADQISDDRP
MEELGLSSRDAVALAADVEDKTGVILTATVAYNHPTIAMLAKRIVEGDPDEGLDADADRF
WERERDAADDIAIVGFSTRFPKAGHTPESTWEALVEGRDGISELPDDRWVEFWSDPQMAE
VLAQRNLRGGYLDDVKGFDADFFQMSPREVEMVDPQQRLAMELTWEALEHARIPASDLKG
GQVGVFVGTSTNDYQLMAALGLGEGSDETAAYALTGTATSIIANRVSYFFDFHGPSVAID
TACSSSLVAVHQAVRSLRSGESEVALAGGVNLILTPAATVGFDTIGAVAKDGHIKAFSAD
ADGMVRSEGGGMFVLKRLSDARRDGDTVLAVVAGSAVNSDGRSNGIFAPNPEAQVEVLRA
AYADAALDPRQVDYIEAHGTGTILGDPIEADALGRVVGRGRVVGAPALLGSAKTNFGHME
SAAGAGALAKVLLSLQHDTIPASLNYSGPNPYIQFDATGLKVTAEPSEWPRYSGHAIAGV
SGFGFGGTNAHVIVREVLPSDLAETVAAEDVPAVTESAVVDDADDDEDFLTEAERAILAA
QATRTPAPAAVAETDPAAGFAPAAVDGAVVPLVISGFLPSRRRKTAADLADWLESPAGRA
TPLADIGRALSHRNHGRSRAVVMARTHDDAIAGVRAVAEGKANPAVYSCDSPDAASAVWL
LSGFGSQHRKMAKQLYTENPVFAKYVDRVDALVENELGYSIAAMFLDDEQTYGIETSQVG
IYTIQVALADTLRHFGAQPGVLVPHSMGEASAAYISGGLSLADATRVICQRSRLMAEGEA
TLTGDDIRLMALVEYSATDITDVLADYPDLEICVYAAPTHTVIGGPEPQVDAIVARAEAE
GKLGRKLQTKGASHTSQVEPILGELAYELTGIEPLPLDFGIYSSVDREAYYRPHAAPVHT
VEYFLKGLRHSVWFSQAVAKTVENGHRTFIELSPNPAVLISVAAVTFTAGLHDAELVETL
KRKEDESHGLVNALMKLYVHGHPVDVASLFGAGGFAAIPRTRFDRKPYWLKARISSGGGA
GSVPGAHVALPDGRHAWEVAAAAVTDPRELVRAAAAQVLSGAAVGAAVAHGEFPAEGTLT
TTLSPHPGGASVTVHVKQDKNFRLLFEAVVTGDPDAAATTAPAAVESASAAEPSGAAVFA
DDKVVVEDEVVDDIGAKWNPESGETVGDRLAIIVGEAMGYDPQDLPREIALIELGLDSLM
AVRIKNRVEFEFDIPQLQLQAMRQANLDDVTKFVEYAVTHRDELDSLTENVAGGGELDTA
ALNAYIDEQNAKRAAGSETAAAEPAVEPALAPTPEAVEPDTAAEPEPAVAQPAPTPVAAA
PTTDITDQRAVAEAAGSDVPPRDAAERLTFGVYAMVTKRSPGGIFNKLPVLEEDAAQALT
DKLNERTGGEIDVEDILDAETIEEMSNYVRDFLDASADTDGFLRYLRLSPEGKKSYDPAA
GDPVPILLFHPAGGNTAAYEALLKRLPADQPVIGFDRGVEGTIEERVREYLPRLRELQPN
GPYVLVGWSFGGALAYGVAQVLREQGENVAFVGLIDVVRPREDMTETPDTKRARLERWKE
FAIRNYDLDADIPIPMDRLVDADDEGQFAIIMEMMSMSGTKIPGGIIEHQRTSFIENRVL
SNISPEPYDGKVVLYRADKMHAGAIELEPQWAEIDEDGRWGEVVDDLEIIHIGGDHLSIV
DEPYIAKIGADLTERVGRIRPDAR
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgaatagcgaacagccagaaggtgtcgatccgggcgccagcattgcgaac
cacgcagccgacggggagaccgccggcggtctgaccgttcccgaactgcaggactggctg
cgcgactgggtgtccgcggccaccggtgtgcccgccgatcagatctccgacgaccgcccg
atggaagagctcggtctgtcctcccgcgacgcggtggccctggccgccgacgtcgaggac
aagaccggtgtcatcctcaccgcgacggtcgcctacaaccatccgaccatcgccatgctg
gcgaagcggatcgtcgagggagatcccgacgagggtctcgacgccgacgccgaccgcttc
tgggagcgcgagcgcgacgccgccgatgacatcgcgatcgtcggcttctccacccgcttc
ccgaaggccgggcacaccccggagtcgacgtgggaggcgctcgtcgagggccgcgacggc
atctccgagctgcccgacgaccggtgggtcgagttctggtccgacccgcagatggccgag
gtgctcgcgcagcgcaacctgcgcggcggatacctcgacgacgtcaagggattcgacgcc
gacttcttccagatgagcccgcgcgaggtcgagatggtcgacccgcagcagcgcctggcg
atggaactgacctgggaggcgctcgagcacgcccgcatcccggccagcgacctcaagggc
ggccaggtcggggtcttcgtcggcacctccaccaacgactaccagctgatggccgcgctc
ggcctcggcgagggatcggacgagaccgccgcatacgccctgaccggtaccgcgacctcg
atcatcgccaaccgtgtctcgtacttcttcgacttccacggcccgtcggtcgcgatcgac
accgcctgctcgtcgtcgctggtcgccgtgcaccaggcggtgcgcagcctgcggtcgggg
gagtccgaggtcgccctcgccggtggcgtcaacctgatcctcaccccggctgccacggtg
ggcttcgacaccatcggagcggtcgccaaggacgggcacatcaaggcgttctccgccgat
gccgacggcatggtgcgctcggagggcggcggcatgttcgtcctcaagcgtctctcggat
gcccgccgcgacggcgacaccgtcctcgcggtggtcgccgggtcggcggtcaactccgac
ggtcgctccaacgggatcttcgcgcccaatccggaggcccaggtcgaggtgttgcgcgcg
gcctacgccgacgccgcactcgatccgcgccaggtcgactacatcgaggcgcacggtacc
ggcaccatcctgggtgacccgatcgaggccgacgcgctcggccgggtggtcggtcgcggc
cgcgtcgtgggcgccccggccctgttgggttcggccaagacgaacttcggccacatggag
tccgcggccggcgccggtgcgctggccaaggtgctgctctcgctgcagcacgacaccatc
ccggcgtcgctgaactactcgggacccaacccctacatccagttcgacgccaccggactc
aaggtgaccgccgagcccagcgaatggccgcggtactccgggcacgccatcgccggtgtc
tccggcttcgggttcggcgggaccaacgcgcacgtcatcgtgcgtgaggtgctgccatct
gatctcgccgaaaccgttgcggccgaggatgttccggccgtcacggagtctgcggtcgtc
gacgacgccgacgacgacgaggacttcctcaccgaggccgagcgggcgatcctcgccgcg
caggccacccggacgccggcgccggccgccgtcgccgagaccgacccggccgccgggttc
gccccggccgcggtcgacggagcggttgtgccgctggtgatctcgggattcctgccgtcg
cgccgccggaagaccgccgccgatctggccgactggctggagtcgccggcgggccgggcc
accccgctcgccgacatcggccgggcactgtcgcaccgcaaccacggccgttcgcgcgcc
gtggtgatggcccgcacccacgacgatgcgatcgccggtgtccgggccgtcgccgagggc
aaggccaatccggccgtgtactcgtgtgattcgccggatgcggcgtcggcggtgtggctg
ctgtcgggcttcggttcccagcaccgcaagatggccaagcagctctacaccgagaacccg
gtgttcgcgaagtacgtcgaccgcgtcgatgcgctggtggagaacgaactcggctactcg
atcgccgcgatgttcctcgacgacgagcagacctacggcatcgagaccagccaggtgggt
atctacaccatccaggtggccctcgccgacacgctgcggcacttcggcgcacaacccggt
gtgctggttccgcattcgatgggtgaggcgtcggcggcctacatctccggcggtctgtcc
ctggcggacgcgacccgcgtgatctgccagcggtcccggctgatggccgagggcgaggcc
accctgaccggcgacgacatccggctgatggcgctggtcgagtacagcgccaccgacatc
accgatgtgctcgccgactaccccgatctggagatctgcgtctacgccgctcccacccac
accgtcatcggtgggccggagccgcaggtcgacgcgatcgtcgcgcgcgccgaggccgag
ggcaagctcggtcgcaaactgcagaccaagggcgccagccacacctcgcaggtggaaccg
atcctgggtgagctcgcctacgagctcaccgggatcgagccgctgccactggatttcggc
atctacagctcggtcgaccgcgaggcctactaccgtccgcacgccgcaccggtgcacacc
gtcgagtacttcctcaagggtctgcggcacagtgtgtggttctcccaggccgtcgccaag
acggtggagaacggacaccgcaccttcatcgagctctcgcccaatccggcggtgctgatc
tcggtggccgcggtgaccttcaccgcgggcctgcacgacgcggaactcgtcgagacgctc
aagcgcaaggaggacgagagccacggcctggtcaacgcgctgatgaagctgtacgtgcac
ggacatccggtggacgtcgcatcgctgttcggtgccggtgggttcgccgcgatcccgcgg
acccgtttcgaccggaagccctactggctcaaggcccggatcagttccggtggtggcgcc
ggatcggtgcccggagcgcatgtcgcgctgcccgacggccggcacgcctgggaggtggcc
gcggctgcggtcaccgatccgcgtgagctcgtccgggccgccgcggcgcaggtgctctcc
ggtgccgcggtcggtgcggccgtcgcccacggtgagttccccgccgagggaaccctgacc
accacgctcagcccgcacccgggcggtgcgtcggtcacggtgcacgtcaagcaggacaag
aacttccggttgctgttcgaggccgtcgtcaccggtgacccggatgccgcggccaccacg
gcacccgcggccgtcgagtcggcgtctgccgcggagccgtccggtgccgcggtcttcgcc
gacgacaaggtggtcgtcgaggacgaggtcgtcgacgacatcggcgccaagtggaacccc
gaatccggtgagacggtgggtgaccggctcgcgatcatcgtcggcgaggcgatgggttac
gacccgcaggacctgccgcgcgagatcgcactgatcgagctgggcctggattcgctgatg
gccgtgcggatcaagaaccgcgtcgagttcgagttcgacatcccgcagctacagctgcag
gcgatgcgtcaggcgaacctcgacgacgtcaccaagttcgtcgagtacgccgtcacccac
cgtgacgagctggactcgctgaccgagaacgtcgccggtggaggagaactcgacaccgcg
gcgctcaacgcctacatcgacgagcagaacgccaagcgggctgcgggatcggagaccgcc
gcggctgaaccggcggtcgagccggccctcgcgccgaccccggaggccgtggagccggat
accgccgcagagcccgaaccggctgtggcgcaaccggccccgacgccggttgcggcagcc
ccgaccaccgacatcaccgatcagcgggccgtcgccgaggcggccggatcggatgtcccg
ccgcgcgatgcggccgagcgtctgaccttcggtgtgtacgcgatggtcaccaagcgctcg
ccgggcggcatcttcaacaagctgccggtgctcgaagaggatgcggcgcaggcgctcacc
gacaagctcaacgagcgcaccggcggcgagatcgacgtcgaggacatcctggacgccgag
accatcgaggagatgtcgaactacgttcgcgacttcctcgacgcgtccgccgacaccgac
ggcttcctgcggtacctgcggttgtcgccggagggcaagaagtcctacgacccggccgcc
ggtgacccggtgccgatcctgctgttccatccggccggcggcaacaccgccgcctacgag
gcgctgctgaagcggctgcccgccgaccagccggtgatcggcttcgaccgcggtgtcgag
gggacgatcgaagagcgtgtgcgcgagtacctcccgcgtctgcgtgagctgcagccgaac
gggccgtacgtcctggtgggatggtcgttcggcggtgcgctggcctacggcgtcgcccag
gtgctgcgcgagcagggcgagaacgtcgccttcgtcggtctgatcgacgtggtccgtccg
cgtgaggacatgaccgagaccccggacaccaagcgtgcccgcctcgaacgctggaaggag
ttcgcgatccgcaactacgatctcgacgccgacatcccgatcccgatggatcgtctcgtc
gacgccgacgacgaggggcagttcgcgatcatcatggagatgatgtcgatgtcggggacc
aagatccccggcggcatcatcgaacaccagcgcacctcgttcatcgagaaccgtgtgttg
agcaacatctcgccggagccgtatgacggcaaggtggtgctctaccgtgccgacaagatg
catgccggcgcgatcgaactcgaaccccagtgggccgagatcgacgaggacgggcgatgg
ggcgaggtggtcgacgacctggagatcatccacatcggtggcgatcacctgtcgatcgtc
gacgagccctacatcgcgaagatcggtgccgatctcaccgagcgtgtcggtcgtatccga
ccggacgcccgctga
DBGET
integrated database retrieval system