Gordonia sp. X0973: HUN08_03755
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Entry
HUN08_03755 CDS
T10819
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
goo Gordonia sp. X0973
Pathway
goo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUN08_03755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goo03400
]
HUN08_03755
Enzymes [BR:
goo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HUN08_03755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HUN08_03755
DNA repair and recombination proteins [BR:
goo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUN08_03755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_8
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QKT06402
UniProt:
A0AA45JIQ7
LinkDB
All DBs
Position
760013..760900
Genome browser
AA seq
295 aa
AA seq
DB search
MPELPEVTAIAQFLDERTAGLPIRRVDVASLAVLKTADPPYTALVGRTVSSVGRIGKYLV
LTTVPGDAADQEPLHLVIHLSRAGWVRWSENLSPKPPRPGGKGPIALRVHCGLPGEGFDV
TEAGTQKRLAVWIVADPLDVERIAGLGPDALTLGAGELGEILAGHSGRIKNVLTDQRIIS
GIGNAYSDEILHRARLSPFAPAKNLSAEQVEVLHDAIVGILRDAIGRLEGPGGVATMKAE
KRSGLKVHARTGLPCPDCGDTVAEVSFADRSFQYCPSCQTGGKKLADRRMSRLLK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgcccgaggtcaccgctatcgcgcagttcctcgacgagcgcaccgccgga
ttgccgatccggcgggtggacgtggcatcgctggcagtgctcaagacggccgatccgccc
tacaccgccttggtcgggcggaccgtctcgtcggtcggtcggatcggcaaatacctcgtc
ctcacgaccgtgcccggcgacgcggccgatcaggagcccctgcatctggtgatccacctg
tcgcgggccgggtgggtgcggtggagtgagaacctgtcacccaaaccgccgcggcccggc
ggcaaggggccgatcgcgctgcgcgtgcactgcgggctgcccggcgaagggttcgacgtc
accgaggccggcacccagaaacgactggcggtgtggatcgtcgccgacccgctcgacgtg
gagcggatcgccgggctgggaccggacgccctaaccctcggcgccggcgagctcggcgag
atcctggccgggcactccgggcggatcaagaacgtcctcaccgatcaacggatcatcagc
gggatcggtaacgcgtactccgacgagattctgcatcgggcacggctgtcgccgttcgcg
ccggcgaagaatctgtccgccgaacaggtggaggtgctgcacgatgccatcgtcggaatc
ctgcgcgacgcgatcgggcggctcgaggggccgggcggggtggcgacgatgaaggcggag
aagcgatcgggcctcaaggtccacgcccggaccggattgccctgccccgactgcggcgac
accgtcgccgaggtgtccttcgccgaccgctccttccagtactgtccgtcatgtcagacc
ggcggcaagaagctggccgaccggcggatgtcacgacttctgaaatag
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