Gordonia sp. X0973: HUN08_06235
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Entry
HUN08_06235 CDS
T10819
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
goo Gordonia sp. X0973
Pathway
goo00300
Lysine biosynthesis
goo00470
D-Amino acid metabolism
goo01100
Metabolic pathways
goo01110
Biosynthesis of secondary metabolites
goo01120
Microbial metabolism in diverse environments
goo01230
Biosynthesis of amino acids
Module
goo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
goo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUN08_06235 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUN08_06235 (lysA)
Enzymes [BR:
goo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HUN08_06235 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QKT06837
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Position
1263536..1264891
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AA seq
451 aa
AA seq
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MSPNSAGAQIPANVYPAGTSRDGDGMLTIAGVRADDLAQRHGTPLFVFDEADFRARCTAM
REAFNRYGKVHYASKAFLSVEIAKWVEQEGLNLDVCSGGELAVALHAGFPAERIALHGNN
KAVDELDDAVAAGVGHIVLDSLIEIERLEQIAARRGAIADVLIRVTPGVNAHTHEFISTA
HEDQKFGFSISGGNAMTAIRAVFASEHLRLVGLHSHIGSQIFELDGFELAAQRVIGLLGD
VLAEFGRERAEQLSIIDLGGGLGISYLPVDDPLPVTRLADSLAQVVAREAAALGLPTPTL
AVEPGRAIAGPPGVTLYRVGTCKDVELDGGAVRRYVSVDGGMSDNIRGPLYGAEYDVRLA
SRVSDAPAAQTRVVGKHCETGDIVIRDCLLPEDLVPGDLLVVGATGAYCYPMSSRYNMAL
RPAVVAVRDGASREILRRETVADLLSLEVPQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccaacagcgcgggagcccagatccccgcgaacgtctacccggccggcaccagc
cgcgacggcgacggcatgctcaccatcgccggggtccgcgccgacgacctcgcgcagcgc
cacggcacgccgctgttcgtcttcgacgaggccgatttccgggcgcgctgcaccgccatg
cgcgaggcattcaatcgctacggcaaggtccactacgcgtcgaaggcctttctgagcgtc
gagatcgccaagtgggtcgagcaggaggggctgaacctcgacgtctgctcgggcggtgag
ctggccgtcgcgctgcacgcgggattcccggctgagcgcatcgcgctgcacggcaacaac
aaggcggtcgacgagctcgacgacgcggtcgccgccggggtcggccacatcgtcctcgac
tcgttgatcgagatcgagcgccttgagcagatcgccgcgcgccgcggcgcgatcgccgat
gtgctgatccgcgtcacccccggcgtcaacgcccacacccacgagttcatctccaccgcg
cacgaggaccagaagttcggcttctcgatcagcggcggcaacgcgatgaccgcgatccgg
gccgtcttcgcgtcggagcatctgcggctggtgggcctgcacagccacatcggttcgcag
atcttcgaactcgacggtttcgaactcgccgcgcagcgcgtgatcggcctgctcggcgac
gtgctcgccgagttcggccgcgaacgagccgaacagctgtcgatcatcgacctgggcggc
gggctgggcatctcgtatctcccggtcgacgacccgcttccggtgacgaggctggccgat
tccctggcgcaggtcgtcgcgcgcgaggcggcggcgctcggcctgccgacgccgacgctg
gccgtcgagccgggccgggccatcgccgggccgcccggtgtcaccctctaccgcgtcggg
acctgcaaggatgtcgaactcgacgggggagcggtgcgccgctacgtgtcggtcgacggc
gggatgagcgacaacatccgcggaccgctgtacggggccgaatacgacgtccggttggcg
tcgcgggtgtccgatgcgccggcggcacagacgcgagtggtgggcaagcactgcgagacg
ggcgatatcgtcatccgtgactgcctgttgcccgaggacctcgtcccgggcgatctgctg
gtcgtgggcgccaccggcgcctactgctatccgatgtcctcgcgctacaacatggcgctg
cgaccggcggtcgtcgcagtgcgcgatggcgcgtcgcgagagatcctgcgacgggagacc
gtcgccgacctgctgtctttggaggtaccgcagtga
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