Gordonia sp. X0973: HUN08_07220
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Entry
HUN08_07220 CDS
T10819
Name
(GenBank) translation initiation factor IF-2 N-terminal domain-containing protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
goo Gordonia sp. X0973
Pathway
goo03018
RNA degradation
Brite
Enzymes [BR:
goo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
HUN08_07220
Messenger RNA biogenesis [BR:
goo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUN08_07220
Ribosome biogenesis [BR:
goo03009
]
Prokaryotic type
rRNA processing factors
HUN08_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QKT07004
UniProt:
A0AA45JIP4
LinkDB
All DBs
Position
1466457..1469420
Genome browser
AA seq
987 aa
AA seq
DB search
MTENGSPADANASSPTTELPDKMRVHALARLLGATSREVLDHLEALGSEIRSASATIERG
IAERVVERVGGLPTGEVAGSAESQTEAQAGGNSLFSAAAEITDAPIAAPVAPAAVNPLFL
PPQQPEPSVVPSRKRAEAPVEAEDGAATDEAASDDEVVENEDDSQQDSDDQPNRARRRRR
GRRGRGRGRGDNGDAQGGDDAEGDEQTEDGGTADQSAADAEKGTAKPASEADDSEASDTD
GSDADESDDEDGTGATSKRRRRRRRRKTGGEGADEGSPDDPPNTVVHEREPRSKRVRDEV
QGISGSTRLEAKRQRRRDGRDAGRRRPPILSESEFLARREAVDRVMVVREKVHAAAEKDH
EDYTQVAVLEDGVLVEHFVTTANSTSMVGNIYLGRVQNVLPGMEAAFVDIGRGRNGVLYA
GEVNWEAAGLDGGSRKIEQALKPGDNVLVQVSKDPVGHKGARLTTQISLAGRYLVYVPGG
SSTGISRKLPDVERKRLKSILGKIVPEGAGVIIRTASEGISAEDLEADIKRLEAQWTKIE
AATEDSTKGGKGGKAKSVAPKALYEEPDLLVRVVRDLFNEDFKKLVVEGQTAWSLVERYI
NDVAPDLMDRVERFEKNGPDAPDSFVTHRIDEQLAKALDRKVWLPSGGTLIIEHTEAMTV
IDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQVRLRDLGGMIIVDFIDMVLESNRDLVL
RRLTEALARDRTRHQVSEVTSLGLVQMTRKRLGTGLLEAFSTTCTNCAGRGVIVHADPVE
VRSSDDAGRDGGGSKRSRRKKGKSEGGAPDAGKSPTHNPAEHPLFRAMHAHIHEHDDEAV
DHIDVDEADEVIGVDAADAVDTLDAVEAEAVVATEPDTAEPEAVEPEPAVAESVVEEVLV
ETVVVEAEPEPAPAPKARHRRVRRAPVSTGSGTTIVIGADNHETPPTQTTTTAGPTSAAA
ESEAVAVVRRPRRRAASRPSGAPQHEA
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaacgggtcgccggctgacgcgaacgcgtcgagcccgacaacagaacttccc
gacaagatgcgcgtgcacgccctcgcccgattgctgggcgccacgagccgcgaggtgctc
gaccacctcgaggcgctcggatcagagatccgcagcgcttccgccactatcgagcggggg
atcgccgaacgcgtcgtcgaacgcgtaggcgggctgccgaccggtgaggtcgccggatct
gccgagtcgcagaccgaggcccaggcgggcggcaacagcttgttctccgccgcggcggag
atcaccgacgcccccatcgcggcaccggtagcacctgccgcggtcaaccccctgttcctg
ccgccgcagcaacccgagccgtccgtggtgccgtcccgcaagcgggccgaagccccggta
gaggccgaagacggcgccgcaacggacgaggccgcgagtgacgacgaggtcgtcgaaaac
gaggacgactcccagcaggactccgacgaccagccgaaccgggcccgacggcgacgtcgg
ggccgccgcggccgcggtcggggacgcggagacaacggcgacgcccagggcggcgacgat
gccgagggcgacgagcagaccgaggacggcggcacggccgatcaatcggcagccgacgcg
gagaagggcacggcgaagcccgcctcggaggccgacgactccgaagcttccgacaccgac
gggtcggacgccgacgagtccgatgacgaggacggcaccggcgcgacctccaagcgccgt
cgacgccgccgccgtcgcaagacgggcggggagggtgccgacgaaggctcgccggatgat
ccgccgaacaccgtcgtgcacgaacgggagccgcgcagcaagcgggtccgtgacgaggtg
cagggcatctccggttcgacgcgtctcgaggccaagcggcagcgccggcgcgacgggcgc
gacgccggccgtcgtcgcccaccgatcttgagcgagtccgagttcctggcgcgtcgcgag
gccgtcgaccgcgtgatggtggtgcgcgagaaggtgcacgccgccgcggagaaggaccac
gaggactacacgcaggtcgccgtcctcgaagacggtgtgctggtcgaacacttcgtgacc
acggccaactcgacgtcgatggtcggcaacatctacctcggccgcgtgcagaacgtcctg
cccggcatggaggcggccttcgtcgacatcggccgcggccgcaacggcgtcctctacgcc
ggcgaggtgaactgggaggccgccggactcgacggcggttcccgcaagatcgagcaggcc
ctcaaaccgggcgacaacgtgctcgtccaggtgtccaaggaccccgtcgggcacaagggt
gcccggttgaccacgcagatctcgttggccggccgctacctggtctacgtgccgggcggc
tcgtcgacgggcatcagccgcaagctccccgatgtcgagcgcaagcgtctcaagtccatt
ctcggcaagatcgtgcccgagggcgccggcgtcatcatccgcaccgcgtcggaggggatc
agcgccgaggacctcgaggccgacatcaagcgcctggaggcgcagtggaccaagatcgag
gccgcgaccgaggattcgaccaagggcggtaagggcggcaaggccaagtcggtggcgccg
aaggccctctacgaggagccggacctgctggtgcgcgtggtgcgcgacctgttcaacgag
gacttcaagaaattggtcgtcgaggggcagactgcctggagcctggtcgagcgctacatc
aacgacgtggcgccggatctcatggaccgtgtcgagcgcttcgagaagaacggccccgac
gcacccgactccttcgtcacccaccggatcgacgagcagctcgcgaaggcgctcgaccgc
aaggtctggctgccgtcgggcggcacgctcatcatcgagcacaccgaggcgatgacggtc
atcgacgtcaacaccggcaagttcaccggttcgggcggcaacctcgaggagacggtcacc
cgcaacaacctggaagcggccgaggagatcgtgcggcaggtgcgtctgcgcgacctgggc
ggcatgatcatcgtcgacttcatcgacatggtgctcgaatcgaaccgcgacctcgtgctg
cggcgtctcaccgaggccctcgcgcgtgaccggacccgccaccaggtgtccgaggtgacg
tcgttgggcctggtccagatgacgcgcaagcggttgggcacgggtctgctcgaggccttc
tcgaccacctgcaccaactgcgccggccgtggggtcatcgtgcatgccgaccccgtcgag
gtgcgttcctccgacgacgccggccgcgacggcggcgggtcgaagcgctcgcgccgcaag
aaggggaagtccgagggtggcgcgcccgacgcgggcaagtcgccgacgcacaaccccgcc
gagcacccgctgttccgcgcgatgcacgcccacatccacgagcacgacgacgaagccgtc
gatcacatcgacgtcgacgaggccgacgaagtgatcggtgtcgacgccgccgacgccgtc
gacaccctggatgctgtggaggcggaggccgtcgtcgccaccgagccggatactgccgag
ccggaggccgtggagcccgagcccgcggtagccgagtccgtcgtcgaagaggttctcgtc
gaaacggtggtcgtcgaggcggagccggagccggcccccgccccgaaggcgcgccatcgt
cgggtccggcgtgcgccggtgtcgaccggatcgggcacgacgatcgtgatcggtgccgac
aaccatgagacgccgccgacccagaccacgaccacggccgggccgacgtcggccgcagca
gaatcggaggcggtggccgtcgtcaggcgtccgcgccgacgagccgccagccgaccgtcg
ggggcgccccagcacgaggcgtga
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