Gordonia sp. X0973: HUN08_10165
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Entry
HUN08_10165 CDS
T10819
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
goo Gordonia sp. X0973
Pathway
goo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUN08_10165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goo03019
]
HUN08_10165
03016 Transfer RNA biogenesis [BR:
goo03016
]
HUN08_10165
Enzymes [BR:
goo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HUN08_10165
Messenger RNA biogenesis [BR:
goo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HUN08_10165
Transfer RNA biogenesis [BR:
goo03016
]
Prokaryotic type
tRNA degradation factors
HUN08_10165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_NusA_1st
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QKT07512
LinkDB
All DBs
Position
complement(2080396..2082651)
Genome browser
AA seq
751 aa
AA seq
DB search
MSDNIDVYEDDVTEATAIIDNGSFGTRTIRFETGRLALQASGSVVAYLDEETMILSTTSA
SKAPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVDG
LRNEIQVIETILSLDPNEYYDVVAINAASASTQIAGLPFSGPVGGVRVALIPTDENKAGQ
WVAFPTVEQLKGAVFNMVVAGRITEGSGDNADVAIMMVEAEATDNVLELIAGGAQAPTEA
IVAEGLEAAKPFIARLCEAQKSLADAAAKPTGEFPLFPPYESDVYEAVEAAAAEKLGQIL
TIAGKQERDEKTDELKAELLDSLGEKFEGREKEIGAAYRSLTKKLVRQRILTDHFRIDGR
GITDIRSLSAEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPEKSKRYMHH
YNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTS
MGSVCASTMSLLNAGVPLKAPVAGIAMGLVSDEVTVDGKTETRYVALTDILGAEDAFGDM
DFKVAGTKDFVTALQLDTKLDGIPSKVLAGALSQARDARLTILDVMAEAIDEPDEMSPYA
PRITTVKIPMDKIGELIGPKGKTINGITEETGANISIEDDGTVFVGAVDGPSAQAAIDAI
NAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIDKVEDVVNVG
SKLRVEIADIDERGKISLIPVADDAPAAADA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacatcgacgtctacgaagacgacgtcaccgaagccaccgcgatcatcgac
aacggcagcttcggcacccgcaccatccgcttcgagaccggccgcctcgcgctgcaggcc
tccggctcggtcgtcgcctacctcgacgaggagacgatgatcctctcgacgacctccgcg
tcgaaggcgccgaaggatcacttcgacttcttcccgctgaccgtcgacgtcgaggagcgc
atgtacgccgcgggccgcatccccggctcgttcttccgccgcgagggccgcccgtcgacc
gacgcgatcctcacctgccgcctcatcgaccggccgctgcgcccgacgttcgtcgacggc
ctgcgcaacgagatccaggtcatcgagacgatcctctctctcgacccgaacgagtactac
gacgtcgtcgcgatcaacgcggcctccgcgtcgacccagatcgccggcctgccgttctcc
ggcccggtcggcggcgtgcgcgtcgccctcatccccaccgacgagaacaaggccggccag
tgggtcgccttcccgaccgtcgagcagctcaagggcgccgtgttcaacatggtcgtcgcc
ggccgcatcacggagggctccggtgacaacgccgacgtcgcgatcatgatggtcgaggcc
gaggccaccgacaacgtcctcgagctcatcgcgggcggtgcccaggcgccgaccgaggcg
atcgtcgcggagggcctcgaggccgccaagccgttcatcgcccgcctgtgtgaggcccag
aagagcctcgccgacgccgccgcgaagccgaccggcgagttcccgctgttcccgccctac
gagagcgacgtctacgaggccgtcgaggccgccgcggcggagaagctcggccagatcctg
acgatcgcgggcaagcaggagcgcgacgagaagaccgacgagctgaaggcggagctgctc
gacagcctcggcgagaagttcgagggccgcgagaaggagatcggcgcggcctaccgctcg
ctgaccaagaagctcgtgcgccagcgcatcctgaccgaccatttccgcatcgacggccgc
ggcatcaccgacatccggtcgctctcggccgaggtcgcggtcatcccgcgcgcccacggc
agcgcattgttcgagcgcggcgagacccagatcatgggtgtcaccacgctcgacatggtc
aagatggcccagcagatcgactcgctcggcccggagaagtccaagcgctacatgcaccac
tacaacttcccgccgtactcgaccggtgagaccggccgcgtcggatcgcccaagcgccgc
gaaatcggccacggtgcgctcgccgagcgcgccctggtgccggtgctgccgagcgtcgag
gagttcccgtacgcgatccgccaggtgtccgaggcgttgggctccaacggctcgacgtcg
atgggctcggtgtgtgcgtcgacgatgtcgctgctcaacgccggtgtgccgctgaaggcg
ccggttgccggcatcgcgatgggcctggtctccgacgaggtcaccgtcgacggcaagacc
gagacccgctacgtggcgctgaccgacatcctcggtgccgaggacgccttcggcgacatg
gacttcaaggtcgccggcacgaaggatttcgtgaccgctctgcagctcgacaccaagctc
gacggcatcccgtcgaaggtgctcgcgggtgcgctgagccaggcccgcgacgcccgactc
acgatcctcgacgtgatggccgaggccatcgacgagccggacgagatgagcccgtacgcg
ccgcgcatcaccaccgtgaagatcccgatggacaagatcggcgagctgatcggccccaag
ggcaagaccatcaacggcatcaccgaggagaccggcgccaacatctcgatcgaggacgac
ggcaccgtgttcgtcggcgcggtcgacggaccgtcggcccaggccgcgatcgacgcgatc
aacgccatcgccaacccgcagctgccgaaggtcggcgagcgcttcctgggcacggtcgtc
aagaccaccgccttcggcgcgttcgtctcgctgctgcccggtcgcgacggcctggtccac
atctccaagctgggcaacggcaagcgcatcgacaaggtcgaggacgtggtgaacgtcggc
tcgaagctgcgcgtggagatcgccgacatcgacgagcgcggcaagatcagcctgatcccc
gtcgccgacgacgccccggcggctgcggacgcctaa
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